Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   NDQ65_RS02335 Genome accession   NZ_CP098538
Coordinates   448489..449106 (+) Length   205 a.a.
NCBI ID   WP_082298535.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain ATCC 49226     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 443489..454106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDQ65_RS02310 (NDQ65_02305) - 443934..444266 (+) 333 WP_003687908.1 hypothetical protein -
  NDQ65_RS02315 (NDQ65_02310) - 444593..445102 (+) 510 WP_003687909.1 isoprenylcysteine carboxyl methyltransferase family protein -
  NDQ65_RS02320 (NDQ65_02315) - 445334..445915 (-) 582 WP_003687910.1 superoxide dismutase -
  NDQ65_RS02325 (NDQ65_02320) dnaB 446078..447484 (+) 1407 WP_003706599.1 replicative DNA helicase -
  NDQ65_RS02330 (NDQ65_02325) pilH 447792..448457 (+) 666 WP_082298536.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  NDQ65_RS02335 (NDQ65_02330) pilV/pilI 448489..449106 (+) 618 WP_082298535.1 type IV pilus modification protein PilV Regulator
  NDQ65_RS02340 (NDQ65_02335) pilJ 449103..450050 (+) 948 WP_082298534.1 PilW family protein Machinery gene
  NDQ65_RS02345 (NDQ65_02340) pilK 450029..450637 (+) 609 WP_047921003.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  NDQ65_RS02350 (NDQ65_02345) pilL 450639..451112 (+) 474 WP_172616930.1 PilX family type IV pilin Machinery gene
  NDQ65_RS02355 (NDQ65_02350) - 451182..451490 (-) 309 WP_047921007.1 AzlD family protein -
  NDQ65_RS02360 (NDQ65_02355) - 451487..452198 (-) 712 Protein_460 AzlC family ABC transporter permease -
  NDQ65_RS02365 (NDQ65_02360) dut 452364..452816 (+) 453 WP_003702446.1 dUTP diphosphatase -
  NDQ65_RS02370 (NDQ65_02365) dapC 452894..454081 (+) 1188 WP_010359932.1 succinyldiaminopimelate transaminase -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22196.08 Da        Isoelectric Point: 4.9758

>NTDB_id=600606 NDQ65_RS02335 WP_082298535.1 448489..449106(+) (pilV/pilI) [Neisseria gonorrhoeae strain ATCC 49226]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYTGPYTPTPSGGDFKLNNNNLISKKDLAKAQLDRFDYELRNALPDAVAIHHAVCKDLSGDAPTLSDSGNFSSNCDDK
ANGDTLIKVLWVNDSAGDSDISRTNLGVSGGNIVYTYQARVGGRE

Nucleotide


Download         Length: 618 bp        

>NTDB_id=600606 NDQ65_RS02335 WP_082298535.1 448489..449106(+) (pilV/pilI) [Neisseria gonorrhoeae strain ATCC 49226]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACACGGGGCCGTACACCCCCACTCCCTCTGGCGGCGATTTCAAGCTTAATAATAATAATTTGATAAGTAA
GAAGGATTTGGCAAAAGCCCAGTTGGACAGGTTCGATTATGAATTGAGAAACGCCTTGCCGGATGCGGTAGCTATTCATC
ACGCCGTCTGCAAGGATTTGTCGGGTGACGCGCCGACATTGTCCGACAGCGGTAATTTTTCTTCAAATTGCGACGATAAG
GCAAACGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGG
GGTGAGCGGCGGCAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

89.806

100

0.902
  pilV Neisseria meningitidis 8013

81.818

100

0.834