Detailed information NTG0592162

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: KZO26_RS10295
• Genome accession: NZ_CP080329
• Coordinates: 2145404..2147827 (-)
• Length: 807 a.a.
• NCBI ID: WP_035184532.1
• Uniprot ID: -
• Organism: Heyndrickxia coagulans strain VHProbi C08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2140404..2152827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZO26_RS10265 (KZO26_10265)	-	2141748..2142839 (-)	1092	WP_014097920.1	AI-2E family transporter	-
KZO26_RS10270 (KZO26_10270)	-	2143101..2143232 (-)	132	WP_014097919.1	DUF3918 family protein	-
KZO26_RS10275 (KZO26_10275)	-	2143250..2143462 (-)	213	WP_026104525.1	hypothetical protein	-
KZO26_RS10280 (KZO26_10280)	-	2143621..2144061 (+)	441	WP_026104526.1	YndM family protein	-
KZO26_RS10285 (KZO26_10285)	-	2144100..2144450 (-)	351	WP_017550592.1	Lrp/AsnC family transcriptional regulator	-
KZO26_RS17670	-	2144457..2144561 (-)	105	WP_014097915.1	AsnC family transcriptional regulator	-
KZO26_RS10290 (KZO26_10290)	-	2144893..2145237 (+)	345	Protein_2024	Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein	-
KZO26_RS10295 (KZO26_10295)	recD2	2145404..2147827 (-)	2424	WP_035184532.1	ATP-dependent RecD-like DNA helicase	Machinery gene
KZO26_RS10300 (KZO26_10300)	-	2147838..2148506 (-)	669	WP_014097911.1	tetratricopeptide repeat protein	-
KZO26_RS10305 (KZO26_10305)	mnmA	2148872..2149987 (-)	1116	WP_014097910.1	tRNA 2-thiouridine(34) synthase MnmA	-
KZO26_RS10310 (KZO26_10310)	-	2150003..2151148 (-)	1146	WP_035184531.1	cysteine desulfurase family protein	-
KZO26_RS10315 (KZO26_10315)	-	2151165..2151584 (-)	420	WP_014097908.1	Rrf2 family transcriptional regulator	-
KZO26_RS10320 (KZO26_10320)	-	2151898..2152566 (-)	669	WP_035184530.1	hypothetical protein	-
KZO26_RS17675	-	2152597..2152758 (-)	162	WP_225620989.1	matrixin family metalloprotease	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90721.78 Da
• Isoelectric Point: 4.8812

>NTDB_id=592162 KZO26_RS10295 WP_035184532.1 2145404..2147827(-) (recD2) [Heyndrickxia coagulans strain VHProbi C08]
MEKQHAMDLFQDEENFIKGKHLATIFHNEQNLYSVIRVRVEETNTGLEDKETVITGYFPRIHEQETYTFFGKMQEHPKFG
PQFQANRFQKDIPNTKQGVIEYLSSDLFNGIGKKTAERIVGVLGENAISKILENPAALDEVPKLAPEKAQLIRDTLVEHQ
GLERVMIGLAQYGFGPQIAMRIYQVYEDEALEKIAQNPYQLVDDIKGIGFGRADELGRQLGISGTHPHRIQAGCCYMLEM
ESMQHGHVYVLKEELAQDVKALLEEYQHVEIPMDLIENELVKLQEESKVIMEEDKVYLPSLYFSEKGIVSNIERIMSQTE
YAEQFPESEFLLALGSLEERIGVEYAPSQKEAIQKALMSPMMILTGGPGTGKTTVIKGIVELYGELHGVSLDPQTYKKDE
VFPIVLAAPTGRAAKRMAESTGLPAMTIHRLLGMTGMEDLDDSEERQVEGKLVIIDEMSMVDTWLANQLLKALPDEIQVI
MVGDEDQLPSVGPGQVLKDLLKSNAIPVVRLTDIYRQKDGSSIIELAHHVKNGRIPENIFQMQADRSFIRCSSGQVAEAV
EKVVKSAKRKGYTAKDIQVLAPMYRGPAGIDRLNSLLQNIFNPNENGARKELKHGDAVYRIGDKVLQLVNQPEHGVYNGD
IGEIVSLFTAKENTEKQDMLIVSFDGIEVTYTKPDFNQITLAYCCSIHKSQGSEFPVVILPVVRSYYRMLRRNLLYTAIT
RSKKILILLGEEPAFRMGVEREDDQKRKTTLCEKLVEALKTAQKEAGTETALSLTEENWDRVDPMIGMAGITPYTYAEEG
QTASQPD

Nucleotide

• Length: 2424 bp

>NTDB_id=592162 KZO26_RS10295 WP_035184532.1 2145404..2147827(-) (recD2) [Heyndrickxia coagulans strain VHProbi C08]
TTGGAAAAACAGCATGCGATGGATTTATTCCAGGACGAGGAAAATTTTATAAAAGGAAAGCATCTCGCGACCATCTTCCA
TAACGAGCAAAATTTGTATTCCGTCATCCGTGTGCGGGTGGAAGAGACCAATACCGGGCTGGAAGATAAGGAAACGGTGA
TTACCGGCTATTTTCCGCGCATCCATGAACAGGAAACGTACACCTTTTTTGGAAAAATGCAGGAACACCCGAAATTCGGC
CCCCAGTTCCAGGCAAATCGCTTCCAAAAAGACATCCCCAATACAAAGCAGGGCGTTATTGAGTATCTTTCCAGTGATTT
ATTTAACGGCATCGGCAAAAAAACGGCGGAGCGGATCGTTGGCGTGCTCGGTGAAAATGCGATCAGCAAAATATTGGAAA
ATCCCGCCGCCCTTGACGAAGTACCGAAACTGGCACCGGAAAAAGCGCAGCTGATCCGTGATACGTTAGTTGAACATCAG
GGGCTTGAACGTGTTATGATCGGGCTTGCGCAATACGGTTTCGGGCCGCAGATTGCGATGCGCATTTACCAGGTTTACGA
GGATGAGGCGCTCGAAAAAATTGCGCAAAATCCATACCAGCTCGTTGATGATATTAAAGGCATCGGTTTCGGGCGGGCCG
ATGAACTCGGCCGGCAGCTCGGCATCAGCGGGACGCATCCGCACCGCATCCAGGCCGGCTGCTGTTACATGCTGGAAATG
GAAAGCATGCAGCACGGTCATGTGTACGTCCTGAAAGAAGAACTTGCACAGGATGTCAAAGCCCTTTTGGAAGAATACCA
GCATGTTGAAATCCCGATGGACTTGATTGAAAATGAGCTGGTGAAACTTCAGGAAGAGAGCAAAGTCATCATGGAAGAAG
ACAAAGTCTATCTTCCGTCCCTCTATTTTTCGGAAAAAGGAATCGTTTCCAATATTGAGCGGATTATGTCGCAAACCGAG
TATGCGGAACAGTTCCCGGAATCTGAATTCCTGCTTGCTTTAGGCAGTCTTGAGGAACGGATCGGGGTCGAGTATGCCCC
GTCGCAAAAGGAAGCCATCCAAAAAGCGCTGATGAGTCCGATGATGATTTTAACGGGCGGGCCCGGCACAGGGAAAACAA
CGGTCATTAAAGGGATTGTGGAACTGTACGGTGAATTGCACGGCGTCTCGCTTGACCCGCAAACCTATAAAAAAGATGAG
GTATTTCCGATTGTTCTCGCGGCGCCGACAGGGAGGGCCGCGAAAAGAATGGCGGAGTCAACTGGTCTGCCGGCGATGAC
GATCCACCGCCTGCTCGGCATGACCGGCATGGAGGACCTGGACGATTCAGAGGAACGGCAAGTAGAAGGCAAGCTTGTCA
TCATTGATGAAATGTCGATGGTCGATACATGGCTTGCGAACCAGCTGTTAAAGGCGCTGCCGGATGAAATCCAAGTCATC
ATGGTTGGGGATGAAGACCAGCTGCCGTCCGTCGGTCCAGGCCAGGTGCTGAAAGATTTATTGAAATCGAACGCCATCCC
GGTTGTTAGGCTGACAGACATATACAGGCAGAAAGATGGTTCTTCGATTATTGAACTGGCCCACCATGTTAAAAATGGCC
GTATTCCGGAAAATATTTTTCAAATGCAGGCAGACCGTTCGTTTATCCGCTGTTCTTCCGGGCAGGTGGCGGAAGCGGTG
GAAAAAGTGGTGAAAAGCGCGAAACGGAAAGGCTATACGGCAAAAGACATTCAGGTGCTGGCGCCGATGTACAGGGGGCC
GGCCGGCATTGACCGTCTGAACAGCCTGTTGCAAAATATTTTTAATCCGAATGAGAACGGGGCCCGCAAAGAGCTGAAGC
ACGGGGACGCGGTTTACCGGATCGGCGATAAGGTACTGCAGCTTGTCAACCAGCCGGAACACGGGGTGTATAACGGCGAT
ATCGGCGAGATTGTCTCGCTTTTTACCGCAAAAGAAAATACGGAAAAACAAGATATGCTCATCGTTTCTTTTGATGGGAT
TGAAGTGACGTATACGAAGCCAGATTTCAATCAGATTACGCTTGCGTATTGCTGTTCGATCCATAAATCGCAAGGAAGCG
AGTTTCCGGTCGTAATTTTGCCGGTTGTCCGCAGCTATTACCGGATGCTGCGCCGAAACTTGCTGTATACGGCGATTACA
AGGAGCAAAAAAATTTTAATTCTGCTTGGCGAAGAACCGGCTTTCCGGATGGGTGTGGAAAGGGAAGATGACCAAAAGCG
GAAGACGACACTGTGTGAAAAACTGGTTGAAGCATTAAAAACGGCACAAAAAGAGGCAGGGACGGAGACAGCCCTGTCCT
TAACAGAAGAAAATTGGGACCGGGTCGACCCGATGATTGGCATGGCGGGCATTACCCCGTACACGTACGCAGAAGAAGGA
CAGACTGCGTCCCAACCGGATTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.67	99.876	0.606