Detailed information NTG0590450

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: KYX49_RS02730
• Genome accession: NZ_CP079944
• Coordinates: 576776..577894 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain 04117201 isolate DstkR-2
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 571776..582894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYX49_RS02700 (KYX49_02685)	-	572605..573453 (+)	849	WP_000336548.1	class II glutamine amidotransferase	-
KYX49_RS02705 (KYX49_02690)	-	573706..574161 (+)	456	WP_000782976.1	bacteriohemerythrin	-
KYX49_RS02710 (KYX49_02695)	-	574314..575381 (+)	1068	WP_002019572.1	hypothetical protein	-
KYX49_RS02715 (KYX49_02700)	-	575381..575704 (+)	324	WP_000442587.1	RnfH family protein	-
KYX49_RS02720 (KYX49_02705)	bamE	575759..576157 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
KYX49_RS02725 (KYX49_02710)	fur	576269..576706 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
KYX49_RS02730 (KYX49_02715)	pilU	576776..577894 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
KYX49_RS02735 (KYX49_02720)	pilT	577922..578959 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
KYX49_RS02740 (KYX49_02725)	-	579086..579778 (+)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=590450 KYX49_RS02730 WP_000347039.1 576776..577894(-) (pilU) [Acinetobacter baumannii strain 04117201 isolate DstkR-2]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=590450 KYX49_RS02730 WP_000347039.1 576776..577894(-) (pilU) [Acinetobacter baumannii strain 04117201 isolate DstkR-2]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395