Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LP6_RS09715 | Genome accession | NC_021350 |
| Coordinates | 2143214..2143627 (-) | Length | 137 a.a. |
| NCBI ID | WP_015444381.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila str. Thunder Bay | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2138214..2148627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP6_RS09705 (LP6_1891) | letS | 2139144..2141876 (+) | 2733 | WP_010947629.1 | hybrid sensor histidine kinase/response regulator | Regulator |
| LP6_RS09710 (LP6_1892) | - | 2141973..2143217 (+) | 1245 | WP_010947630.1 | 6-phosphofructokinase | - |
| LP6_RS09715 (LP6_1893) | pilA2 | 2143214..2143627 (-) | 414 | WP_015444381.1 | pilin | Machinery gene |
| LP6_RS09720 (LP6_1894) | pilA2 | 2143824..2144234 (-) | 411 | WP_016356941.1 | pilin | Machinery gene |
| LP6_RS09725 (LP6_1895) | - | 2144537..2144854 (+) | 318 | WP_010947633.1 | BolA/IbaG family iron-sulfur metabolism protein | - |
| LP6_RS09730 (LP6_1896) | - | 2144929..2146350 (+) | 1422 | WP_010947634.1 | APC family permease | - |
| LP6_RS09735 (LP6_1897) | - | 2146481..2147911 (-) | 1431 | WP_010947635.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14505.91 Da Isoelectric Point: 6.2016
>NTDB_id=58930 LP6_RS09715 WP_015444381.1 2143214..2143627(-) (pilA2) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=58930 LP6_RS09715 WP_015444381.1 2143214..2143627(-) (pilA2) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.732 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
45.89 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.601 |
100 |
0.409 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.143 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |