Detailed information NTG0585941

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HXH02_RS23870
• Genome accession: NZ_CP096110
• Coordinates: 4860655..4861680 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain DP033
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4855655..4866680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HXH02_RS23850 (HXH02_23965)	metJ	4856840..4857157 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
HXH02_RS23855 (HXH02_23970)	yiiX	4857217..4857825 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
HXH02_RS23860 (HXH02_23975)	rpmE	4857886..4858098 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
HXH02_RS23865 (HXH02_23980)	priA	4858301..4860499 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
HXH02_RS23870 (HXH02_23985)	cytR	4860655..4861680 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
HXH02_RS23875 (HXH02_23990)	ftsN	4861772..4862731 (+)	960	WP_000068834.1	cell division protein FtsN	-
HXH02_RS23880 (HXH02_23995)	hslV	4862824..4863354 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
HXH02_RS23885 (HXH02_24000)	hslU	4863364..4864695 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
HXH02_RS23890 (HXH02_24005)	menA	4864762..4865688 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HXH02_RS23895 (HXH02_24010)	rraA	4865781..4866266 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
HXH02_RS23900 (HXH02_24015)	zapB	4866351..4866596 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=585941 HXH02_RS23870 WP_000644908.1 4860655..4861680(+) (cytR) [Escherichia coli strain DP033]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=585941 HXH02_RS23870 WP_000644908.1 4860655..4861680(+) (cytR) [Escherichia coli strain DP033]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625