Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | KTR69_RS07625 | Genome accession | NZ_CP077960 |
| Coordinates | 1506676..1507578 (+) | Length | 300 a.a. |
| NCBI ID | WP_218697438.1 | Uniprot ID | A0AAW5LFX6 |
| Organism | Mammaliicoccus sciuri strain WHA07 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1501676..1512578
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KTR69_RS07585 | - | 1501760..1502314 (+) | 555 | WP_096791884.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| KTR69_RS07590 | - | 1502315..1503763 (+) | 1449 | WP_096791885.1 | rhomboid family intramembrane serine protease | - |
| KTR69_RS07595 | - | 1503768..1503959 (+) | 192 | WP_078099923.1 | YqgQ family protein | - |
| KTR69_RS07600 | - | 1503956..1504927 (+) | 972 | WP_218697436.1 | ROK family glucokinase | - |
| KTR69_RS07605 | - | 1504927..1505241 (+) | 315 | WP_058611614.1 | MTH1187 family thiamine-binding protein | - |
| KTR69_RS07610 | - | 1505271..1505510 (-) | 240 | WP_016911885.1 | DUF2759 domain-containing protein | - |
| KTR69_RS07615 | - | 1505608..1506240 (+) | 633 | WP_058611613.1 | MBL fold metallo-hydrolase | - |
| KTR69_RS07620 | - | 1506274..1506522 (-) | 249 | WP_025904960.1 | DUF2626 family protein | - |
| KTR69_RS07625 | comGA | 1506676..1507578 (+) | 903 | WP_218697438.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KTR69_RS07630 | comGB | 1507568..1508608 (+) | 1041 | WP_196968298.1 | competence type IV pilus assembly protein ComGB | - |
| KTR69_RS07635 | comGC | 1508623..1508940 (+) | 318 | WP_058611611.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KTR69_RS07640 | comGD | 1508921..1509367 (+) | 447 | WP_227531649.1 | competence type IV pilus minor pilin ComGD | - |
| KTR69_RS07645 | comGE | 1509351..1509632 (+) | 282 | WP_058611610.1 | competence type IV pilus minor pilin ComGE | - |
| KTR69_RS07650 | - | 1509607..1510041 (+) | 435 | WP_196968296.1 | competence type IV pilus minor pilin ComGF | - |
| KTR69_RS07655 | - | 1510276..1510764 (+) | 489 | WP_196968295.1 | shikimate kinase | - |
| KTR69_RS07660 | gcvT | 1510957..1512045 (+) | 1089 | WP_196968294.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 34387.26 Da Isoelectric Point: 6.1198
>NTDB_id=585704 KTR69_RS07625 WP_218697438.1 1506676..1507578(+) (comGA) [Mammaliicoccus sciuri strain WHA07]
MEKLFKSIINDAINSNASDIHFVPLNDDKVFVQVRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
MEKLFKSIINDAINSNASDIHFVPLNDDKVFVQVRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
Nucleotide
Download Length: 903 bp
>NTDB_id=585704 KTR69_RS07625 WP_218697438.1 1506676..1507578(+) (comGA) [Mammaliicoccus sciuri strain WHA07]
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTATCAATTCTAATGCGAGTGATATTCACTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAGTGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGATTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTATCAATTCTAATGCGAGTGATATTCACTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAGTGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGATTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
52.5 |
93.333 |
0.49 |
| comGA | Staphylococcus aureus N315 |
52.5 |
93.333 |
0.49 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
40.58 |
92 |
0.373 |
| pilB | Haemophilus influenzae Rd KW20 |
35.032 |
100 |
0.367 |