Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | KU522_RS08735 | Genome accession | NZ_CP077877 |
| Coordinates | 1745459..1745929 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934770.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 357 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1740459..1750929
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU522_RS08700 (KU522_08690) | - | 1740886..1741107 (+) | 222 | WP_000594790.1 | hypothetical protein | - |
| KU522_RS08705 (KU522_08695) | - | 1741100..1741261 (+) | 162 | WP_050956528.1 | DUF1270 domain-containing protein | - |
| KU522_RS08710 (KU522_08700) | - | 1741354..1741614 (+) | 261 | WP_000291489.1 | DUF1108 family protein | - |
| KU522_RS08715 (KU522_08705) | - | 1741623..1741886 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| KU522_RS08720 (KU522_08710) | - | 1741895..1743838 (+) | 1944 | WP_000700562.1 | AAA family ATPase | - |
| KU522_RS08725 (KU522_08715) | - | 1743840..1744760 (+) | 921 | WP_000138481.1 | recombinase RecT | - |
| KU522_RS08730 (KU522_08720) | - | 1744841..1745458 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| KU522_RS08735 (KU522_08725) | ssbA | 1745459..1745929 (+) | 471 | WP_000934770.1 | single-stranded DNA-binding protein | Machinery gene |
| KU522_RS08740 (KU522_08730) | - | 1745959..1746843 (+) | 885 | WP_000148301.1 | DnaD domain protein | - |
| KU522_RS08745 (KU522_08735) | - | 1746850..1747068 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| KU522_RS08750 (KU522_08740) | - | 1747077..1747481 (+) | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KU522_RS08755 (KU522_08745) | - | 1747494..1747862 (+) | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| KU522_RS08760 (KU522_08750) | - | 1747866..1748108 (+) | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| KU522_RS08765 (KU522_08755) | - | 1748173..1748622 (+) | 450 | WP_000982711.1 | YopX family protein | - |
| KU522_RS08770 (KU522_08760) | - | 1748619..1749128 (+) | 510 | WP_001105598.1 | hypothetical protein | - |
| KU522_RS08775 (KU522_08765) | - | 1749125..1749535 (+) | 411 | WP_000197967.1 | hypothetical protein | - |
| KU522_RS08780 (KU522_08770) | - | 1749528..1750064 (+) | 537 | WP_001066444.1 | dUTPase | - |
| KU522_RS08785 (KU522_08775) | - | 1750101..1750307 (+) | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| KU522_RS08790 (KU522_08780) | rinB | 1750304..1750453 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| KU522_RS08795 (KU522_08785) | - | 1750453..1750653 (+) | 201 | WP_000265041.1 | DUF1514 family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17713.63 Da Isoelectric Point: 5.2672
>NTDB_id=584444 KU522_RS08735 WP_000934770.1 1745459..1745929(+) (ssbA) [Staphylococcus aureus strain 357]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=584444 KU522_RS08735 WP_000934770.1 1745459..1745929(+) (ssbA) [Staphylococcus aureus strain 357]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |