Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   MP619_RS10490 Genome accession   NZ_CP095081
Coordinates   2105277..2106017 (-) Length   246 a.a.
NCBI ID   WP_129556294.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 2100277..2111017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS10470 (MP619_10440) - 2101382..2102377 (-) 996 WP_268227770.1 IS30 family transposase -
  MP619_RS10475 (MP619_10445) jag 2102655..2103569 (-) 915 WP_129556293.1 RNA-binding cell elongation regulator Jag/EloR -
  MP619_RS10480 (MP619_10450) - 2103581..2104408 (-) 828 WP_111679436.1 YidC/Oxa1 family membrane protein insertase -
  MP619_RS10485 (MP619_10455) rnpA 2104374..2104733 (-) 360 WP_003056083.1 ribonuclease P protein component -
  MP619_RS10490 (MP619_10460) comE/blpR 2105277..2106017 (-) 741 WP_129556294.1 LytTR family DNA-binding domain-containing protein Regulator
  MP619_RS10495 (MP619_10465) - 2106021..2107304 (-) 1284 WP_129556295.1 sensor histidine kinase -
  MP619_RS10500 (MP619_10470) - 2107305..2108648 (-) 1344 WP_129556296.1 GHKL domain-containing protein -
  MP619_RS10505 (MP619_10475) - 2108801..2109823 (+) 1023 WP_129555386.1 IS30 family transposase -

Sequence


Protein


Download         Length: 246 a.a.        Molecular weight: 28934.26 Da        Isoelectric Point: 4.8691

>NTDB_id=581877 MP619_RS10490 WP_129556294.1 2105277..2106017(-) (comE/blpR) [Streptococcus dysgalactiae strain WJ001]
MMNIFILEDDFIQQTRIESVVADILEEAKIPCNQLEVFANPHKLFESIQERGDHQLYFLDIEIGAEDRRGLELAADIRQK
DPNAVIVFVTTHSEFAPISFKYKVSALDFIDKAVDKEQFRDQIEECIRYTYEMMSSRESEDMFLFETPQTRLKLPYKDIL
YFATATTPHKVCLWTQTERLEFYGNLSEIQAVAPKLFLCHRSYLVNLDKVVRIDKSKQLLYFDNGDSCMVSRLKMKCLFE
KWEALH

Nucleotide


Download         Length: 741 bp        

>NTDB_id=581877 MP619_RS10490 WP_129556294.1 2105277..2106017(-) (comE/blpR) [Streptococcus dysgalactiae strain WJ001]
ATGATGAATATTTTTATTCTTGAAGATGATTTTATCCAACAGACACGTATTGAATCTGTAGTGGCAGACATCTTGGAAGA
AGCTAAAATCCCTTGTAATCAGCTAGAAGTGTTTGCCAATCCTCATAAATTATTTGAAAGCATTCAAGAAAGAGGCGACC
ACCAGTTATATTTTTTAGACATTGAGATTGGTGCTGAGGATCGCCGAGGGCTTGAATTGGCAGCAGATATTCGACAAAAA
GACCCCAATGCGGTCATTGTGTTTGTTACCACACATTCTGAATTTGCTCCAATTTCTTTTAAATACAAAGTGTCTGCCTT
AGATTTTATTGACAAAGCAGTTGATAAGGAACAATTCAGGGATCAGATTGAAGAATGTATCCGCTATACCTATGAGATGA
TGTCTAGCCGAGAATCAGAAGACATGTTTTTATTTGAGACCCCTCAGACAAGGTTGAAATTACCTTACAAAGATATCCTT
TATTTTGCCACTGCTACGACACCCCACAAGGTGTGTTTGTGGACTCAGACGGAGAGACTGGAGTTTTATGGCAATTTATC
TGAGATACAAGCTGTGGCTCCAAAGCTTTTCTTATGCCATAGATCTTACTTGGTTAATCTAGATAAGGTTGTGCGTATTG
ATAAATCCAAACAGCTCCTTTATTTTGATAATGGGGATTCCTGCATGGTCTCACGCTTAAAAATGAAATGCCTTTTTGAA
AAATGGGAGGCCTTACATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

48.117

97.154

0.467

  comE/comE1 Streptococcus equinus JB1

42.857

96.748

0.415

  comE/comE2 Streptococcus equinus JB1

40.408

99.593

0.402

  comE/comE2 Streptococcus gordonii strain NCTC7865

39.113

100

0.394

  comE/comE1 Streptococcus gordonii str. Challis substr. CH1

39.113

100

0.394

  comE Streptococcus pneumoniae Rx1

36.929

97.967

0.362

  comE Streptococcus pneumoniae D39

36.929

97.967

0.362

  comE Streptococcus pneumoniae R6

36.929

97.967

0.362

  comE Streptococcus pneumoniae TIGR4

36.929

97.967

0.362

  comE Streptococcus mitis NCTC 12261

36.929

97.967

0.362

  comE Streptococcus mitis SK321

36.929

97.967

0.362