Detailed information NTG0581514

Bioinformatically predicted

Overview

• Name: rcrR
• Type: Regulator
• Locus tag: JGX27_RS06845
• Genome accession: NZ_CP077423
• Coordinates: 1346149..1346589 (-)
• Length: 146 a.a.
• NCBI ID: WP_012962070.1
• Uniprot ID: A0A139MWJ9
• Organism: Streptococcus gallolyticus subsp. gallolyticus TX20005
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1340881..1359309	1346149..1346589	within	0

Gene organization within MGE regions

Location: 1340881..1359309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JGX27_RS06825 (JGX27_06825)	-	1340881..1341333 (-)	453	WP_009854390.1	MarR family transcriptional regulator	-
JGX27_RS06830 (JGX27_06830)	-	1341323..1342300 (-)	978	WP_009854391.1	zinc-binding dehydrogenase	-
JGX27_RS06835 (JGX27_06835)	rcrQ	1342569..1344341 (-)	1773	WP_009854392.1	ABC transporter ATP-binding protein	Regulator
JGX27_RS06840 (JGX27_06840)	rcrP	1344331..1346145 (-)	1815	WP_009854393.1	ABC transporter ATP-binding protein	Regulator
JGX27_RS06845 (JGX27_06845)	rcrR	1346149..1346589 (-)	441	WP_012962070.1	MarR family winged helix-turn-helix transcriptional regulator	Regulator
JGX27_RS06850 (JGX27_06850)	-	1346764..1347174 (-)	411	WP_009854395.1	peptide deformylase	-
JGX27_RS06855 (JGX27_06855)	-	1347171..1347680 (-)	510	WP_009854396.1	GNAT family N-acetyltransferase	-
JGX27_RS06860 (JGX27_06860)	gdhA	1347947..1349296 (-)	1350	WP_009854398.1	NADP-specific glutamate dehydrogenase	-
JGX27_RS06865 (JGX27_06865)	-	1349543..1350040 (+)	498	WP_009854399.1	DUF308 domain-containing protein	-
JGX27_RS06870 (JGX27_06870)	queF	1350097..1350588 (-)	492	WP_009854400.1	preQ(1) synthase	-
JGX27_RS06875 (JGX27_06875)	queE	1350601..1351317 (-)	717	WP_172855747.1	7-carboxy-7-deazaguanine synthase QueE	-
JGX27_RS06880 (JGX27_06880)	queD	1351307..1351753 (-)	447	WP_009854402.1	6-carboxytetrahydropterin synthase QueD	-
JGX27_RS06885 (JGX27_06885)	queC	1351759..1352406 (-)	648	WP_043878574.1	7-cyano-7-deazaguanine synthase QueC	-
JGX27_RS06890 (JGX27_06890)	-	1352647..1354416 (-)	1770	WP_009854404.1	ABC transporter ATP-binding protein	-
JGX27_RS06895 (JGX27_06895)	-	1354419..1356158 (-)	1740	WP_043878575.1	ABC transporter ATP-binding protein	-
JGX27_RS06900 (JGX27_06900)	-	1356236..1358107 (-)	1872	WP_009854406.1	ABC-F family ATP-binding cassette domain-containing protein	-
JGX27_RS06905 (JGX27_06905)	-	1358104..1359309 (-)	1206	WP_009854407.1	CCA tRNA nucleotidyltransferase	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 17156.66 Da
• Isoelectric Point: 9.3565

>NTDB_id=581514 JGX27_RS06845 WP_012962070.1 1346149..1346589(-) (rcrR) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MHKKDPFSQFRDFINLMENRVHALAESHGVENLAGPQGFAVMYLRDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQVVSSKEDKRYKQVVLTELGKSKAQDIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE

Nucleotide

• Length: 441 bp

>NTDB_id=581514 JGX27_RS06845 WP_012962070.1 1346149..1346589(-) (rcrR) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGCACAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAATGGAAAATCGTGTCCACGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTAGCTGGTCCACAGGGATTTGCAGTGATGTATCTTCGTGATAATCCCGATAAAGAAATTTATA
TTAAGGACATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAGTTGTTTCGTCAAAAGAAGATAAGCGTTATAAGCAAGTTGTGTTGACTGAGCTTGGAAAATCAAAGGCTCAGGA
TATTCAAGATTTCCATGATGAAATGCATAGGCAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATCTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterproScan.

• MarR family (MarR_2) (35-91)

3D structure

• AlphaFold DB: A0A139MWJ9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrR	Streptococcus mutans UA159	56.643	97.945	0.555