Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   SPYKS030_RS08755 Genome accession   NZ_AP018337
Coordinates   1640390..1640941 (-) Length   183 a.a.
NCBI ID   WP_011106595.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain KS030     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1635390..1645941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYKS030_RS08725 (SPYKS030_16600) - 1635804..1636436 (-) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  SPYKS030_RS08730 (SPYKS030_16610) yhbY 1636505..1636813 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  SPYKS030_RS08735 (SPYKS030_16620) yqeH 1636838..1637956 (-) 1119 WP_002991828.1 ribosome biogenesis GTPase YqeH -
  SPYKS030_RS08740 (SPYKS030_16630) - 1637956..1638483 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  SPYKS030_RS08750 (SPYKS030_16650) - 1638646..1639779 (-) 1134 WP_011055034.1 ISAs1-like element IS1548 family transposase -
  SPYKS030_RS08755 (SPYKS030_16660) comX/sigX/comX2/sigX2 1640390..1640941 (-) 552 WP_011106595.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22309.13 Da        Isoelectric Point: 10.0375

>NTDB_id=58000 SPYKS030_RS08755 WP_011106595.1 1640390..1640941(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain KS030]
MSCCFFVVLFILGIVKKKRRLKMSIETRAVFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=58000 SPYKS030_RS08755 WP_011106595.1 1640390..1640941(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain KS030]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGTGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATTTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.