Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   MTO79_RS03185 Genome accession   NZ_CP094474
Coordinates   620826..621608 (+) Length   260 a.a.
NCBI ID   WP_003131572.1    Uniprot ID   -
Organism   Lactococcus lactis strain SCB469     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 615826..626608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO79_RS03160 (MTO79_03160) vicX 615849..616661 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  MTO79_RS03165 (MTO79_03165) vicK 616832..618274 (-) 1443 WP_014570382.1 cell wall metabolism sensor histidine kinase WalK Regulator
  MTO79_RS03170 (MTO79_03170) yycF 618267..618968 (-) 702 WP_003131580.1 response regulator YycF -
  MTO79_RS03175 (MTO79_03175) tmk 619146..619781 (+) 636 WP_003131575.1 dTMP kinase -
  MTO79_RS03180 (MTO79_03180) - 619914..620774 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  MTO79_RS03185 (MTO79_03185) yaaT 620826..621608 (+) 783 WP_003131572.1 stage 0 sporulation family protein Regulator
  MTO79_RS03190 (MTO79_03190) yabA 621601..621927 (+) 327 WP_003131570.1 DNA replication initiation control protein YabA -
  MTO79_RS03195 (MTO79_03195) rsmI 621927..622802 (+) 876 WP_010905318.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  MTO79_RS03200 (MTO79_03200) - 622879..623070 (-) 192 WP_003131566.1 hypothetical protein -
  MTO79_RS03205 (MTO79_03205) mvk 623133..624065 (-) 933 WP_003131564.1 mevalonate kinase -
  MTO79_RS03210 (MTO79_03210) mvaD 624371..625327 (+) 957 WP_010905319.1 diphosphomevalonate decarboxylase -
  MTO79_RS03215 (MTO79_03215) - 625314..626303 (+) 990 WP_058221589.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29804.21 Da        Isoelectric Point: 5.4775

>NTDB_id=577898 MTO79_RS03185 WP_003131572.1 620826..621608(+) (yaaT) [Lactococcus lactis strain SCB469]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNELNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=577898 MTO79_RS03185 WP_003131572.1 620826..621608(+) (yaaT) [Lactococcus lactis strain SCB469]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATGA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385