Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   MTO79_RS03160 Genome accession   NZ_CP094474
Coordinates   615849..616661 (-) Length   270 a.a.
NCBI ID   WP_003131583.1    Uniprot ID   Q9CIG7
Organism   Lactococcus lactis strain SCB469     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 610849..621661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO79_RS03135 (MTO79_03135) ytpR 611075..611701 (+) 627 WP_003131594.1 YtpR family tRNA-binding protein -
  MTO79_RS03140 (MTO79_03140) - 611864..613204 (+) 1341 WP_014570381.1 FAD-dependent oxidoreductase -
  MTO79_RS03145 (MTO79_03145) - 613294..613683 (+) 390 WP_010905314.1 single-stranded DNA-binding protein -
  MTO79_RS03150 (MTO79_03150) groES 613803..614087 (+) 285 WP_003131589.1 co-chaperone GroES -
  MTO79_RS03155 (MTO79_03155) groL 614175..615803 (+) 1629 WP_003131585.1 chaperonin GroEL -
  MTO79_RS03160 (MTO79_03160) vicX 615849..616661 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  MTO79_RS03165 (MTO79_03165) vicK 616832..618274 (-) 1443 WP_014570382.1 cell wall metabolism sensor histidine kinase WalK Regulator
  MTO79_RS03170 (MTO79_03170) yycF 618267..618968 (-) 702 WP_003131580.1 response regulator YycF -
  MTO79_RS03175 (MTO79_03175) tmk 619146..619781 (+) 636 WP_003131575.1 dTMP kinase -
  MTO79_RS03180 (MTO79_03180) - 619914..620774 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  MTO79_RS03185 (MTO79_03185) yaaT 620826..621608 (+) 783 WP_003131572.1 stage 0 sporulation family protein Regulator

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30522.37 Da        Isoelectric Point: 5.8494

>NTDB_id=577895 MTO79_RS03160 WP_003131583.1 615849..616661(-) (vicX) [Lactococcus lactis strain SCB469]
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
DLYANEDTWSELDSKNALGKIPVEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKKDLKILDTSHEHASQLYDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=577895 MTO79_RS03160 WP_003131583.1 615849..616661(-) (vicX) [Lactococcus lactis strain SCB469]
ATGACTGAACAAAATGGCTTTAAATATTCCATTTTAGCCTCTGGTTCAACAGGAAATTCTTTTTACTTAGAAACTCCAAA
GAAAAAAATTCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTATCAGAAATTGACCGTGACATTCATG
ATATTGATGCTTTATTAATTACCCATGAACATAGTGACCATATCAAAGGGATTGGTGTTTTGGCAAGAAAATATGGTATT
GACCTTTACGCAAATGAAGATACTTGGTCTGAACTAGATAGTAAAAATGCTTTAGGAAAAATCCCTGTTGAACAAAAACA
TCTGTTTGAAATGGGAAAAACAATGACTTTTGGTGATATTGATATTGAATCTTTCGGCGTGAGTCACGATGCTATCGCAC
CACAGTTTTATCGTTTCATGAAAGATAACAAAAGTTTTGTTATGCTAACTGATACAGGTTATGTATCCGATAGAATGCGT
GGAACCATTGAAAATGCAGATGCTTATCTTATGGAATCAAACCATGACATTGAGATACTCCGCATGGGAGCTTATCCTTG
GCGGACAAAGCAACGTATCCTAAGTGACCAAGGCCACTTATCTAATGAGGACGGCGCTGAGGCTGCTTTTAGTATTCATG
GTAATAAGACAAAACGAATTTTTCTAGGGCACTTGAGTTTAAATAATAATATCAAAGAACTTGCTCATCTTACTATGGAT
GGTTACTTACAGCAACATGATGTCGATACCAAAAAGGACTTGAAGATCCTTGATACTAGTCACGAACATGCTAGTCAACT
TTACGATATTTAG

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

68.519

100

0.685