Detailed information NTG0574496

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KM776_RS18240
• Genome accession: NZ_CP076290
• Coordinates: 3656153..3657316 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Q12
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3651153..3662316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KM776_RS18210 (KM776_18210)	-	3651418..3651837 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
KM776_RS18215 (KM776_18215)	comFC	3651911..3652600 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
KM776_RS18220 (KM776_18220)	-	3652606..3652890 (-)	285	WP_003151389.1	competence protein ComFB	-
KM776_RS18225 (KM776_18225)	comFA	3652948..3654333 (-)	1386	WP_063174504.1	DEAD/DEAH box helicase	Machinery gene
KM776_RS18230 (KM776_18230)	-	3654441..3655289 (-)	849	WP_014305929.1	DegV family protein	-
KM776_RS18235 (KM776_18235)	degU	3655387..3656076 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KM776_RS18240 (KM776_18240)	degS	3656153..3657316 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
KM776_RS18245 (KM776_18245)	-	3657539..3658186 (+)	648	WP_003151384.1	YigZ family protein	-
KM776_RS18250 (KM776_18250)	-	3658191..3659405 (+)	1215	WP_014305930.1	LCP family protein	-
KM776_RS18255 (KM776_18255)	-	3659495..3660571 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
KM776_RS18260 (KM776_18260)	-	3660704..3661900 (-)	1197	WP_069013672.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=574496 KM776_RS18240 WP_003151385.1 3656153..3657316(-) (degS) [Bacillus velezensis strain Q12]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=574496 KM776_RS18240 WP_003151385.1 3656153..3657316(-) (degS) [Bacillus velezensis strain Q12]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCACGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948