Detailed information NTG0571963

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: KMZ33_RS09560
• Genome accession: NZ_CP076113
• Coordinates: 2018544..2019665 (+)
• Length: 373 a.a.
• NCBI ID: WP_241951379.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain GS2020-X2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2013544..2024665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KMZ33_RS09540	napG	2015723..2016475 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
KMZ33_RS09545	napH	2016475..2017350 (+)	876	WP_241951378.1	quinol dehydrogenase ferredoxin subunit NapH	-
KMZ33_RS09550	-	2017356..2017781 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
KMZ33_RS09555	-	2017797..2018390 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
KMZ33_RS09560	dprA	2018544..2019665 (+)	1122	WP_241951379.1	DNA-processing protein DprA	Machinery gene
KMZ33_RS09565	lptD	2019773..2022121 (-)	2349	WP_241951380.1	LPS assembly protein LptD	-
KMZ33_RS09570	-	2022185..2022736 (-)	552	WP_241951381.1	DNA-3-methyladenine glycosylase I	-
KMZ33_RS09575	tal	2022900..2023853 (+)	954	WP_005718405.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41570.68 Da
• Isoelectric Point: 6.2207

>NTDB_id=571963 KMZ33_RS09560 WP_241951379.1 2018544..2019665(+) (dprA) [Pasteurella multocida strain GS2020-X2]
MSSYLPLLLRLLQIPRLGPLAIQRLLEHVSPAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
SHGKTIAVLGSGLEVIYPKKHRALAEKIIEHQGALVSEFLPFQAPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALSHTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=571963 KMZ33_RS09560 WP_241951379.1 2018544..2019665(+) (dprA) [Pasteurella multocida strain GS2020-X2]
ATGTCATCTTATCTGCCTCTTTTATTGCGTTTGTTACAAATTCCGCGCTTGGGTCCGCTGGCGATCCAACGTTTATTGGA
ACATGTCAGCCCAGCAGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACGC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCTCATCAAGCGGTGGTGGAT
AGCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTACCCGAAAAAACACCGCGCTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAAGCCCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATCAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATCACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGTCTCATACGGAGAACGCCTTTTCTCAACAGGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.081	99.196	0.606
dprA	Glaesserella parasuis strain SC1401	52.857	93.834	0.496
dprA	Vibrio cholerae strain A1552	45.135	99.196	0.448
dprA	Vibrio campbellii strain DS40M4	44.865	99.196	0.445
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394