Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   MM522_RS07260 Genome accession   NZ_CP093067
Coordinates   1441319..1443322 (+) Length   667 a.a.
NCBI ID   WP_033885144.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATC-3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1436319..1448322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS07220 (MM522_07220) pghL 1436684..1437442 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  MM522_RS07225 (MM522_07225) - 1437469..1437918 (-) 450 WP_176551648.1 YndM family protein -
  MM522_RS07230 (MM522_07230) fosM 1438126..1438560 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  MM522_RS07235 (MM522_07235) - 1438469..1438745 (+) 277 Protein_1414 hypothetical protein -
  MM522_RS07240 (MM522_07240) dinR/lexA 1439097..1439714 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  MM522_RS07245 (MM522_07245) yneA 1439864..1440181 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  MM522_RS07250 (MM522_07250) dinL 1440200..1440853 (+) 654 WP_015714011.1 recombinase family protein -
  MM522_RS07255 (MM522_07255) ynzC 1440917..1441150 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  MM522_RS07260 (MM522_07260) recP/tkt 1441319..1443322 (+) 2004 WP_033885144.1 transketolase Machinery gene
  MM522_RS07265 (MM522_07265) sirA 1443475..1443921 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  MM522_RS07270 (MM522_07270) yneF 1444007..1444225 (+) 219 WP_003221221.1 YneF family protein -
  MM522_RS07275 (MM522_07275) ynzD 1444299..1444472 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  MM522_RS07280 (MM522_07280) ccdA 1444692..1445399 (+) 708 WP_015252000.1 cytochrome c-type biogenesis protein CcdA -
  MM522_RS07285 (MM522_07285) yneI 1445488..1445850 (+) 363 WP_003245707.1 response regulator -
  MM522_RS07290 (MM522_07290) yneJ 1445929..1446420 (+) 492 WP_010886519.1 CcdC family protein -
  MM522_RS07295 (MM522_07295) yneK 1446451..1446879 (-) 429 WP_015251998.1 DynA interaction protein YneK -
  MM522_RS07300 (MM522_07300) cotM 1447114..1447506 (-) 393 WP_015251997.1 outer spore coat protein CotM -
  MM522_RS07305 (MM522_07305) sspP 1447587..1447733 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  MM522_RS07310 (MM522_07310) sspO 1447765..1447911 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72299.44 Da        Isoelectric Point: 4.7941

>NTDB_id=570409 MM522_RS07260 WP_033885144.1 1441319..1443322(+) (recP/tkt) [Bacillus subtilis strain ATC-3]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNKVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=570409 MM522_RS07260 WP_033885144.1 1441319..1443322(+) (recP/tkt) [Bacillus subtilis strain ATC-3]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCTGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATTGCCTCCGGA
TCCGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATTGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACAAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562