Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | MID01_RS13580 | Genome accession | NZ_CP092369 |
| Coordinates | 2609992..2611119 (+) | Length | 375 a.a. |
| NCBI ID | WP_004398842.1 | Uniprot ID | P45943 |
| Organism | Bacillus subtilis strain ZW | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2604992..2616119
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MID01_RS13550 (MID01_13550) | - | 2605570..2605748 (-) | 179 | Protein_2630 | hypothetical protein | - |
| MID01_RS13555 (MID01_13555) | arsC | 2606103..2606522 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| MID01_RS13560 (MID01_13560) | acr3 | 2606534..2607574 (-) | 1041 | WP_032722149.1 | arsenite efflux transporter Acr3 | - |
| MID01_RS13565 (MID01_13565) | yqcK | 2607597..2608037 (-) | 441 | WP_032722151.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| MID01_RS13570 (MID01_13570) | arsR | 2608096..2608413 (-) | 318 | WP_029318103.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| MID01_RS13575 (MID01_13575) | yqcI | 2608785..2609549 (-) | 765 | WP_017696291.1 | YqcI/YcgG family protein | - |
| MID01_RS13580 (MID01_13580) | rapC | 2609992..2611119 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | Regulator |
| MID01_RS13585 (MID01_13585) | phrE | 2611109..2611243 (+) | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| MID01_RS13590 (MID01_13590) | - | 2611353..2611511 (+) | 159 | WP_003245945.1 | hypothetical protein | - |
| MID01_RS13595 (MID01_13595) | yqcG | 2611881..2613476 (+) | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| MID01_RS13600 (MID01_13600) | yqcF | 2613491..2614069 (+) | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| MID01_RS13605 (MID01_13605) | - | 2614187..2614333 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| MID01_RS13610 (MID01_13610) | - | 2614330..2614692 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| MID01_RS13615 (MID01_13615) | - | 2614708..2615187 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44636.38 Da Isoelectric Point: 7.3392
>NTDB_id=565042 MID01_RS13580 WP_004398842.1 2609992..2611119(+) (rapC) [Bacillus subtilis strain ZW]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
NKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTRAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
NKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTRAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=565042 MID01_RS13580 WP_004398842.1 2609992..2611119(+) (rapC) [Bacillus subtilis strain ZW]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGACTTGCTTATTTATTATCAAC
TAATGGCCTTTCGCCATAAAATTATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AATAAAATTGAGGGCCATAAGAAAAAATTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAGAGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATACAACATTTATAAGAAACACGAGCTTTACTCTGTTCGTCGTATTCAGTGCCATTTTGTCATTGCCGGTAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCCGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGCTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTATTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTTCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGACTTGCTTATTTATTATCAAC
TAATGGCCTTTCGCCATAAAATTATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AATAAAATTGAGGGCCATAAGAAAAAATTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAGAGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATACAACATTTATAAGAAACACGAGCTTTACTCTGTTCGTCGTATTCAGTGCCATTTTGTCATTGCCGGTAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCCGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGCTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTATTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTTCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.897 |
100 |
0.413 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.196 |
100 |
0.384 |