Detailed information NTG0564152

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: MA544_RS06435
• Genome accession: NZ_CP092017
• Coordinates: 1230316..1231266 (+)
• Length: 316 a.a.
• NCBI ID: WP_057035865.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 15065A
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1225316..1236266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MA544_RS06415 (MA544_06415)	-	1225810..1227360 (+)	1551	WP_238523066.1	glycosyltransferase	-
MA544_RS06420 (MA544_06420)	-	1227329..1228216 (-)	888	WP_238523067.1	glycosyltransferase family 2 protein	-
MA544_RS06425 (MA544_06425)	-	1228242..1229387 (-)	1146	WP_057035867.1	glycosyltransferase family 8 protein	-
MA544_RS06430 (MA544_06430)	waaV	1229436..1230257 (-)	822	WP_057035866.1	glycosyltransferase family 2 protein	-
MA544_RS06435 (MA544_06435)	waaF	1230316..1231266 (+)	951	WP_057035865.1	lipopolysaccharide heptosyltransferase II	Regulator
MA544_RS06440 (MA544_06440)	-	1231252..1232016 (-)	765	WP_002872239.1	glycosyltransferase family 25 protein	-
MA544_RS06445 (MA544_06445)	gmhA	1232016..1232576 (-)	561	WP_057035864.1	D-sedoheptulose 7-phosphate isomerase	-
MA544_RS06450 (MA544_06450)	rfaE1	1232573..1233958 (-)	1386	WP_057035863.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
MA544_RS06455 (MA544_06455)	rfaD	1233951..1234904 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
MA544_RS06460 (MA544_06460)	gmhB	1234905..1235466 (-)	562	Protein_1268	HAD family hydrolase	-
MA544_RS06465 (MA544_06465)	-	1235547..1235849 (+)	303	WP_002852762.1	cytochrome c	-
MA544_RS06470 (MA544_06470)	ccoS	1235872..1236078 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36395.01 Da
• Isoelectric Point: 10.3316

>NTDB_id=564152 MA544_RS06435 WP_057035865.1 1230316..1231266(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 15065A]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=564152 MA544_RS06435 WP_057035865.1 1230316..1231266(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 15065A]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCACGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.357	99.367	0.918