Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   LVJ79_RS04790 Genome accession   NZ_CP091518
Coordinates   903396..904010 (+) Length   204 a.a.
NCBI ID   WP_003786042.1    Uniprot ID   F5S632
Organism   Kingella kingae strain 4177/66     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 898396..909010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVJ79_RS04760 (LVJ79_04760) - 898591..899250 (-) 660 WP_032827637.1 MotA/TolQ/ExbB proton channel family protein -
  LVJ79_RS04765 (LVJ79_04765) - 899312..900235 (-) 924 WP_003786038.1 energy transducer TonB -
  LVJ79_RS04770 (LVJ79_04770) - 900548..901078 (+) 531 WP_003786039.1 inorganic diphosphatase -
  LVJ79_RS04775 (LVJ79_04775) dnaB 901208..902617 (+) 1410 WP_003786040.1 replicative DNA helicase -
  LVJ79_RS10655 - 902651..903154 (+) 504 WP_003786041.1 pilus assembly FimT family protein -
  LVJ79_RS04790 (LVJ79_04790) pilV/pilI 903396..904010 (+) 615 WP_003786042.1 type IV pilus modification protein PilV Regulator
  LVJ79_RS04795 (LVJ79_04795) - 904031..905095 (+) 1065 WP_003786043.1 PilW family protein -
  LVJ79_RS04800 (LVJ79_04800) - 905129..905737 (+) 609 WP_003786044.1 pilus assembly PilX family protein -
  LVJ79_RS04805 (LVJ79_04805) - 905744..906229 (+) 486 WP_003786045.1 type IV pilin protein -
  LVJ79_RS04810 (LVJ79_04810) - 906353..908017 (+) 1665 WP_003786047.1 AMP-binding protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22268.41 Da        Isoelectric Point: 7.8261

>NTDB_id=561768 LVJ79_RS04790 WP_003786042.1 903396..904010(+) (pilV/pilI) [Kingella kingae strain 4177/66]
MKNMTYFHTKYSMKGATLLEVMISVLLLTFGILALMAAQLRSVASISEAENRSIVSQAAEALAEGMQMNAVLTKNGTTYR
RRYSNYVPKSKPLYPGSAVTAPTSLNRTNITKAELAAKHLDEFEYVLSTQLPNVSVLAYAICLDKPDATPPVLGDGGALT
DNCAPNNNERDTNMIKIAWRMGNANGTDNNQQSTTYTYMLEVGN

Nucleotide


Download         Length: 615 bp        

>NTDB_id=561768 LVJ79_RS04790 WP_003786042.1 903396..904010(+) (pilV/pilI) [Kingella kingae strain 4177/66]
ATGAAAAATATGACTTATTTTCATACTAAATATTCAATGAAAGGTGCAACACTACTGGAAGTGATGATTTCCGTGTTGTT
GCTGACCTTTGGTATTTTGGCATTGATGGCGGCGCAGTTGCGTTCTGTTGCAAGCATTAGTGAAGCGGAAAATCGCAGTA
TTGTGTCGCAGGCTGCAGAAGCGTTAGCAGAAGGCATGCAAATGAATGCAGTTCTGACTAAAAATGGAACGACTTATCGT
CGTCGTTATTCTAATTATGTGCCAAAGAGTAAGCCATTGTATCCAGGCAGCGCAGTCACAGCTCCTACTTCTTTGAACAG
AACAAATATTACAAAAGCAGAGCTGGCAGCAAAACATTTAGATGAATTTGAATATGTTTTGAGTACTCAATTACCGAATG
TATCTGTGCTTGCATATGCGATTTGTTTAGATAAACCAGATGCAACTCCTCCTGTTTTGGGTGATGGCGGGGCATTGACC
GATAATTGTGCACCAAACAATAATGAGCGTGACACCAATATGATTAAGATTGCATGGCGCATGGGTAATGCCAATGGAAC
GGACAATAATCAACAATCTACTACTTATACCTATATGTTAGAAGTAGGCAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5S632

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

36.111

100

0.382