Detailed information NTG0558781

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KCL43_RS05495
• Genome accession: NZ_CP073275
• Coordinates: 1151026..1152255 (-)
• Length: 409 a.a.
• NCBI ID: WP_111710590.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain IN-6992
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1146026..1157255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCL43_RS05485 (KCL43_05485)	-	1147050..1150052 (-)	3003	WP_165623194.1	leucine-rich repeat domain-containing protein	-
KCL43_RS05490 (KCL43_05490)	yihA	1150417..1151016 (-)	600	WP_012677890.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
KCL43_RS05495 (KCL43_05495)	clpX	1151026..1152255 (-)	1230	WP_111710590.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KCL43_RS05500 (KCL43_05500)	-	1152291..1152461 (-)	171	WP_012515696.1	hypothetical protein	-
KCL43_RS05505 (KCL43_05505)	-	1152481..1152978 (-)	498	WP_012679519.1	dihydrofolate reductase	-
KCL43_RS05510 (KCL43_05510)	-	1153059..1153898 (-)	840	WP_043040647.1	thymidylate synthase	-
KCL43_RS05515 (KCL43_05515)	-	1154083..1155261 (+)	1179	WP_014622941.1	hydroxymethylglutaryl-CoA synthase	-
KCL43_RS05520 (KCL43_05520)	-	1155248..1156531 (+)	1284	WP_172458527.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45171.69 Da
• Isoelectric Point: 4.5726

>NTDB_id=558781 KCL43_RS05495 WP_111710590.1 1151026..1152255(-) (clpX) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
MAGNRSNDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLEILNQYVIGQER
AKRALSVAVYNHYKRISFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDDNASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLNTEDLIRI
LTEPRNALVKQYQALLSYDGVELEFEKGALEAIAGRAIERKTGARGLRSIIEETMLDIMFEVPSQEEVTKVRITKEAVEG
QSKPVLEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=558781 KCL43_RS05495 WP_111710590.1 1151026..1152255(-) (clpX) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
ATGGCAGGAAATCGTAGTAACGATATTAAGGTTCATTGCTCGTTTTGCGGCAAGAGCCAAGACGAAGTGAAAAAAATTAT
TGCAGGTAATAACGTCTTTATTTGTAACGAATGTGTTGCCTTATCACAAGAAATCATCAAGGAAGAATTGGCAGAAGAGG
TTCTCGCTGATCTGACTGAGGTACCAAAGCCAAAAGAGCTGCTTGAGATTTTAAATCAATACGTCATTGGGCAGGAGCGT
GCTAAGAGAGCCTTATCAGTTGCAGTTTACAACCACTACAAGAGGATTTCATTTACTGAGAGTCGTGACGATGATGATGT
GGATTTGCAGAAGTCCAATATTCTGATGATTGGACCAACAGGCTCAGGAAAGACCTTTTTGGCACAGACCCTAGCTAAGA
GTTTGAATGTTCCGTTTGCTATTGCTGATGCAACGTCTTTGACTGAGGCAGGCTATGTCGGAGAAGATGTGGAAAATATC
CTCCTGAAATTAATTCAAGCCGCTGATTACAATGTTGAGCGTGCAGAGCGTGGCATTATTTATGTTGATGAAATTGATAA
AATCGCTAAAAAAGGTGAGAATGTCTCTATCACTCGTGATGTATCAGGAGAAGGTGTCCAACAAGCCTTGCTAAAAATTA
TTGAGGGAACGGTTGCTAGTGTTCCACCGCAAGGTGGTCGTAAGCACCCAAACCAAGAGATGATACAGATTGATACCAAA
AATATCTTGTTTATCGTCGGAGGCGCCTTTGATGGTATCGAAGAAATTGTCAAGCAGCGCTTGGGAGAAAAGATCATTGG
CTTTGGGCAAAATAGTCGAAAGATTGATGACAATGCTTCCTATATGCAGGAGATCATTGCTGAGGATATTCAAAAATTTG
GTCTGATTCCCGAATTTATTGGACGCTTGCCTGTTGTGGCAGCGCTTGAGCAGCTTAATACTGAGGATTTGATTCGTATT
TTAACAGAGCCTAGAAATGCCCTTGTGAAGCAATATCAAGCCTTATTGTCATATGATGGCGTAGAGCTTGAGTTTGAAAA
GGGTGCTCTGGAGGCTATTGCAGGCAGGGCTATTGAGCGCAAGACTGGTGCGCGTGGTCTGAGGTCTATTATCGAAGAAA
CCATGCTGGATATCATGTTTGAGGTGCCAAGCCAAGAGGAAGTAACCAAGGTACGCATTACTAAGGAAGCTGTCGAGGGT
CAGTCAAAGCCCGTTTTAGAGATAGCCTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.753	100	0.888
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.102	98.044	0.579