Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SMUNUM_RS04355 Genome accession   NZ_AP014571
Coordinates   879311..879745 (+) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans LP13     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 874311..884745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS04325 (SMNUM_0807) gdhA 874493..875842 (+) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -
  SMUNUM_RS04330 (SMNUM_0808) - 875954..876337 (-) 384 WP_002263287.1 DUF3021 family protein -
  SMUNUM_RS04335 (SMNUM_0809) queF 876446..876934 (-) 489 WP_002263288.1 preQ(1) synthase -
  SMUNUM_RS04340 (SMNUM_0810) queE 876947..877663 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  SMUNUM_RS04345 (SMNUM_0811) queD 877660..878106 (-) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  SMUNUM_RS04350 (SMNUM_0812) queC 878106..878759 (-) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  SMUNUM_RS04355 (SMNUM_0813) rcrR 879311..879745 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SMUNUM_RS04360 (SMNUM_0814) rcrP 879749..881551 (+) 1803 WP_002263293.1 ATP-binding cassette domain-containing protein Regulator
  SMUNUM_RS04365 (SMNUM_0815) rcrQ 881541..883295 (+) 1755 WP_002263294.1 ABC transporter ATP-binding protein Regulator
  SMUNUM_RS04370 (SMNUM_0816) tpx 883492..883977 (+) 486 WP_002263295.1 thiol peroxidase -
  SMUNUM_RS04375 (SMNUM_0817) - 884114..884584 (+) 471 WP_002267997.1 hypothetical protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=55533 SMUNUM_RS04355 WP_002263292.1 879311..879745(+) (rcrR) [Streptococcus mutans LP13]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=55533 SMUNUM_RS04355 WP_002263292.1 879311..879745(+) (rcrR) [Streptococcus mutans LP13]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1

Multiple sequence alignment