Detailed information NTG0055392

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PSEST_RS01275
• Genome accession: NC_019936
• Coordinates: 272579..273859 (+)
• Length: 426 a.a.
• NCBI ID: WP_015275268.1
• Uniprot ID: L0GHT1
• Organism: Stutzerimonas stutzeri RCH2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 267579..278859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSEST_RS01255 (Psest_0254)	-	268433..268837 (+)	405	WP_015275264.1	hypothetical protein	-
PSEST_RS01260 (Psest_0255)	rsmD	268849..269463 (-)	615	WP_015275265.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PSEST_RS01265 (Psest_0256)	-	269463..271004 (-)	1542	WP_015275266.1	M16 family metallopeptidase	-
PSEST_RS01270 (Psest_0257)	-	270997..272349 (-)	1353	WP_015275267.1	M16 family metallopeptidase	-
PSEST_RS01275 (Psest_0258)	pilA	272579..273859 (+)	1281	WP_015275268.1	signal recognition particle-docking protein FtsY	Machinery gene
PSEST_RS01280 (Psest_0259)	ftsE	273856..274527 (+)	672	WP_015275269.1	cell division ATP-binding protein FtsE	-
PSEST_RS01285 (Psest_0260)	ftsX	274524..275543 (+)	1020	WP_015275270.1	permease-like cell division protein FtsX	-
PSEST_RS01290 (Psest_0261)	rpoH	275656..276510 (+)	855	WP_015275271.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 45637.06 Da
• Isoelectric Point: 4.5635

>NTDB_id=55392 PSEST_RS01275 WP_015275268.1 272579..273859(+) (pilA) [Stutzerimonas stutzeri RCH2]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQQPVAEQPAAEPQEDSLPHAEQPETEIEQPVIDAPAVLSERAVEAEILPEPE
PEPEPEPEPEPEPEPEPELVIAPVPVVAAAPAQAPAKLGFFARLKQGLSKTSSSIGEGMASLFLGKKAIDDDLLDELETR
LLTADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELAGLLKPVEQPLVVDSGKRPYVILVVGVNGVGKTTTIGKL
AKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNSIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNL
MEELKKVRRVMGKLDDSAPHEVLLVLDAGTGQNAINQTRQFNQSVELTGLVLTKLDGTAKGGVIFALAKQFGTPIRYIGV
GEGIDDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1281 bp

>NTDB_id=55392 PSEST_RS01275 WP_015275268.1 272579..273859(+) (pilA) [Stutzerimonas stutzeri RCH2]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGTGAAAAGAAAGGCCTGTTTGGCTGGCTGCGCAAGAA
GCCGCAGCAGCCGGTGGCCGAGCAGCCCGCCGCCGAGCCGCAGGAAGACAGCCTGCCGCATGCCGAGCAGCCTGAGACCG
AAATCGAACAGCCGGTAATCGATGCCCCTGCGGTATTGTCCGAGCGGGCAGTCGAAGCCGAAATACTCCCAGAGCCAGAG
CCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCTGGTAATTGCACCTGTGCCGGTAGT
GGCGGCTGCGCCCGCCCAAGCGCCGGCCAAGCTCGGCTTCTTCGCGCGCCTCAAGCAGGGTCTGTCCAAGACCAGCTCCA
GTATCGGCGAAGGCATGGCCAGCCTGTTTCTCGGCAAGAAGGCCATCGACGACGACCTGCTCGACGAGCTGGAAACCCGT
TTGCTCACCGCCGACGTCGGTGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGTGTGTCGCGCAAGGAGCT
GGCCGACAGCGGCGCGCTCTACACGGCACTGCAGGAAGAGCTCGCTGGCCTGCTCAAGCCTGTCGAGCAACCGCTCGTGG
TCGACAGCGGCAAGCGCCCCTACGTGATCCTTGTGGTTGGCGTTAATGGCGTCGGCAAGACCACCACGATCGGCAAGCTG
GCCAAGAAGCTGCAGCTCGAAGGCAAGAAAGTCATGCTCGCCGCCGGCGACACCTTCCGCGCCGCGGCGGTCGAGCAGCT
GCAGGTATGGGGCGAGCGCAACAGCATTCCGGTGATCGCCCAGCACACCGGCGCCGACTCCGCCTCGGTGATCTTCGATG
CCGTGCAGGCCGCCAAGGCGCGTGGCATCGACGTGCTGATCGCTGACACCGCGGGCCGTCTGCATACCAAGGACAACCTG
ATGGAGGAGCTGAAGAAGGTCCGTCGGGTGATGGGCAAGCTCGACGATTCCGCCCCCCATGAAGTGCTGCTGGTGCTCGA
CGCCGGCACCGGCCAGAACGCCATCAACCAGACCCGGCAGTTCAATCAATCGGTCGAGTTGACCGGCCTGGTGTTGACCA
AGCTCGATGGCACCGCCAAGGGCGGGGTCATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGTTACATCGGTGTG
GGCGAGGGGATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAAGCGCTTTTCGCTCAGCGGGAAGACGCATG
A

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (221-420)

• SRP54-type protein, helical bundle domain (SRP54_N) (136-201)

3D structure

• AlphaFold DB: L0GHT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.763	99.061	0.493