Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | LUA14_RS06695 | Genome accession | NZ_CP089530 |
| Coordinates | 1264924..1266060 (+) | Length | 378 a.a. |
| NCBI ID | WP_087920760.1 | Uniprot ID | A7Z3N2 |
| Organism | Bacillus amyloliquefaciens strain LS1-002-014s | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1259924..1271060
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUA14_RS06665 (LUA14_06665) | - | 1259967..1261325 (+) | 1359 | WP_025284598.1 | sensor histidine kinase | - |
| LUA14_RS06670 (LUA14_06670) | - | 1261445..1261627 (+) | 183 | Protein_1255 | ATP-binding cassette domain-containing protein | - |
| LUA14_RS06675 (LUA14_06675) | - | 1261787..1261978 (+) | 192 | WP_025284599.1 | hypothetical protein | - |
| LUA14_RS06685 (LUA14_06685) | - | 1263342..1264106 (-) | 765 | WP_020955677.1 | sulfite exporter TauE/SafE family protein | - |
| LUA14_RS06690 (LUA14_06690) | - | 1264251..1264718 (-) | 468 | WP_025284602.1 | DinB family protein | - |
| LUA14_RS06695 (LUA14_06695) | rapC | 1264924..1266060 (+) | 1137 | WP_087920760.1 | Rap family tetratricopeptide repeat protein | Regulator |
| LUA14_RS06700 (LUA14_06700) | - | 1266050..1266184 (+) | 135 | WP_003154881.1 | PhrA family phosphatase inhibitor | - |
| LUA14_RS06705 (LUA14_06705) | - | 1266327..1267280 (+) | 954 | WP_015417280.1 | N-acetylmuramoyl-L-alanine amidase | - |
| LUA14_RS06710 (LUA14_06710) | - | 1267318..1267695 (-) | 378 | WP_007610770.1 | PH domain-containing protein | - |
| LUA14_RS06715 (LUA14_06715) | - | 1267805..1268410 (+) | 606 | WP_015239671.1 | poly-gamma-glutamate hydrolase family protein | - |
| LUA14_RS06720 (LUA14_06720) | - | 1268549..1269139 (-) | 591 | WP_007610775.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LUA14_RS06725 (LUA14_06725) | xre | 1269289..1269627 (-) | 339 | WP_003154871.1 | HTH-type transcriptional regulator Xre | - |
| LUA14_RS06730 (LUA14_06730) | - | 1269818..1269997 (+) | 180 | WP_007407285.1 | hypothetical protein | - |
| LUA14_RS06735 (LUA14_06735) | - | 1269987..1270814 (+) | 828 | WP_025284603.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 45073.28 Da Isoelectric Point: 4.9159
>NTDB_id=551844 LUA14_RS06695 WP_087920760.1 1264924..1266060(+) (rapC) [Bacillus amyloliquefaciens strain LS1-002-014s]
MRMKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPLKEDPSQPE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSK
AAEYFETSVSICRSEKFDNLPHSIYSLTQVLYKQNTTAEAEKQYRLGLSIAREYNDELFVNLFQFLHALYGKEMDNASVR
HTFDFLEEHMLYPYVEELAHDAAKFYMKHGQPEKALTFYEKMVHAQKQIQRGDCLYEI
MRMKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPLKEDPSQPE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSK
AAEYFETSVSICRSEKFDNLPHSIYSLTQVLYKQNTTAEAEKQYRLGLSIAREYNDELFVNLFQFLHALYGKEMDNASVR
HTFDFLEEHMLYPYVEELAHDAAKFYMKHGQPEKALTFYEKMVHAQKQIQRGDCLYEI
Nucleotide
Download Length: 1137 bp
>NTDB_id=551844 LUA14_RS06695 WP_087920760.1 1264924..1266060(+) (rapC) [Bacillus amyloliquefaciens strain LS1-002-014s]
TTGAGGATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCA
CGTCCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATCGAGGATATGGAAGAAGATCAGGATCTGCTGCTGT
ATTATTCATTAATGGAATTCAGACACCGTGTCATGCTGGATTACATCAAGCCCTTAAAAGAGGACCCTTCTCAGCCTGAG
TTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCG
AGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCG
TTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATATTTTACAACCTGAAACAAACCTACGTCTCC
ATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGGAATTATGATGACATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAAC
AAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA
GCAGCCGAATATTTTGAGACATCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTCCGCATTCTATTTACTCATT
AACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCAGAGAAGCAATACCGCCTCGGGCTCAGTATCGCCCGCGAAT
ACAATGATGAATTGTTTGTGAATCTGTTCCAATTTTTACATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG
CACACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATGATGCTGCCAAATTTTACAT
GAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAAAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATT
GTCTATATGAAATCTAA
TTGAGGATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCA
CGTCCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATCGAGGATATGGAAGAAGATCAGGATCTGCTGCTGT
ATTATTCATTAATGGAATTCAGACACCGTGTCATGCTGGATTACATCAAGCCCTTAAAAGAGGACCCTTCTCAGCCTGAG
TTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCG
AGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCG
TTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATATTTTACAACCTGAAACAAACCTACGTCTCC
ATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGGAATTATGATGACATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAAC
AAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA
GCAGCCGAATATTTTGAGACATCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTCCGCATTCTATTTACTCATT
AACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCAGAGAAGCAATACCGCCTCGGGCTCAGTATCGCCCGCGAAT
ACAATGATGAATTGTTTGTGAATCTGTTCCAATTTTTACATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG
CACACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATGATGCTGCCAAATTTTACAT
GAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAAAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATT
GTCTATATGAAATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
44.415 |
99.471 |
0.442 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.48 |
100 |
0.426 |