Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   J4G45_RS05005 Genome accession   NZ_CP071770
Coordinates   876115..880689 (+) Length   1524 a.a.
NCBI ID   WP_180044340.1    Uniprot ID   -
Organism   Acinetobacter towneri strain GX5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 871115..885689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G45_RS04980 (J4G45_04980) - 871578..872222 (-) 645 WP_131261508.1 hypothetical protein -
  J4G45_RS04985 (J4G45_04985) pilG 872499..872882 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  J4G45_RS04990 (J4G45_04990) - 872915..873283 (+) 369 WP_004975526.1 response regulator -
  J4G45_RS04995 (J4G45_04995) - 873287..873823 (+) 537 WP_180051661.1 chemotaxis protein CheW -
  J4G45_RS05000 (J4G45_05000) - 873870..875945 (+) 2076 WP_179988579.1 methyl-accepting chemotaxis protein -
  J4G45_RS05005 (J4G45_05005) chpA 876115..880689 (+) 4575 WP_180044340.1 Hpt domain-containing protein Regulator
  J4G45_RS05010 (J4G45_05010) - 880693..881151 (+) 459 WP_167846162.1 hypothetical protein -
  J4G45_RS05015 (J4G45_05015) dapE 881235..882368 (-) 1134 WP_179988577.1 succinyl-diaminopimelate desuccinylase -
  J4G45_RS05020 (J4G45_05020) - 882510..882656 (-) 147 WP_004968261.1 entericidin A/B family lipoprotein -
  J4G45_RS05025 (J4G45_05025) - 882777..883661 (-) 885 WP_179988576.1 DUF1853 family protein -
  J4G45_RS05030 (J4G45_05030) - 883749..884129 (+) 381 WP_004968265.1 YbaN family protein -
  J4G45_RS05035 (J4G45_05035) elsL 884139..884663 (+) 525 WP_131261501.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1524 a.a.        Molecular weight: 168966.55 Da        Isoelectric Point: 4.1990

>NTDB_id=547629 J4G45_RS05005 WP_180044340.1 876115..880689(+) (chpA) [Acinetobacter towneri strain GX5]
MKEILKNLVETMTLPEDSYLEQDAEILEIFVEEIEEIFEELNPLFTTWFANPTDQETLVTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVLSGAVTLNTDIQKYAKTVLNIYQYKLYPIFKQVGLIDLDLRPLVLLGQQLQQNQSPEPALEELLVL
ADQLTATDMPTGLELTDAAVETAAVAAVESSEDVMTAEEMPQTEVAQEEAADASLLAETLAIFVEEAEEHLATIDQFLAQ
DQIYSQDYNGLIRALHTLRGSSSMAQIDQVFQASSKVENLFKAFVQDEIESTSKETALLVQYAEFVRDYLHVLRQGHCDG
LDVIYATFNKAWDSYGFSTSDTEDSNPQGLVSKLIELNIDRLLDAEFEFDKLAQAQFPSYLEELSAQAQLLVEHTDNRAS
VGIHQFTEELKAAYDSVLAKPILLNSEYGYELFAQAHQEFIHLFDTLAAGQRVTVTEDIQKTLNDLTAFVQQDIDAIALE
DAETSVSDNAVETTVVAEPEAVPAAVASENSGTVNLAQLSQRIASDQQNMHADDANKDFDPDLLDIFLEEAEELLVGMDE
DVNTWSKDASDTSALNNLMRYLHTLKGGANMISATHIGLIAHNLESIYERIINNQIVVSPALIQIIRLVQDDIADRIQTI
RDERVDYAAPESIAILGNIVSLAQGDADVSVASATTAAQPEQTIEAVEEVDAQPELAVEALQDTTADLAEDDAVIADDAH
FEDAAAAAFEPITETVSLEASAESEDEQLHSIVVETFREEAEEILDAADQRLKQWFEQRSDRSILLQLQRAAHSLKGGAR
MAEIESVAQIAYQLESAFEQFAVHQFNSNVYDALLQTTLAWLRDAIFKADYSNYDSLKSSLSAMQFVDVSAQLPERLTHT
DLLSPSRSYEFVQGDGTEPPAMSGEWGETTQLDNSNEMIRISADLVEKMIDLSGENSINRSRIEMELGQLGGTLNEMELA
IKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQS
RIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPTELVVYNTEGELDRTILERLVTPFEHMLRNAVDHGIEDPAQ
RAAANKPEVGKIELNITRQGTDVVVTFVDDGKGIDDAKIKEKALSLGLIKADQNLDKNEILQYIFHPGFTTAQSVTQISG
RGVGLDVVQSEIKALGGHVSVDSTLGQGTTFSIRVPTTVAVSDALMVKVGDQQFAVPLAQIDRIVRIAPTTLESYFNSNE
DFFQIDNQNYKLRYLSEFVGNQPLPRLSHVGHSLPVLLIKGSTGQTIALLVDQLIGSRGQIVVKPIGQQFSSIGAIAGAT
ILGDGQVCLILDGQNIARQILATQRTKQASDQRDSQRRDTRRLIMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAMEQ
LENVKPDLMLLDIEMPRMDGFEVTNLVRHHDMHSNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEQLLA
VSQG

Nucleotide


Download         Length: 4575 bp        

>NTDB_id=547629 J4G45_RS05005 WP_180044340.1 876115..880689(+) (chpA) [Acinetobacter towneri strain GX5]
ATGAAAGAAATATTAAAAAATTTAGTCGAAACAATGACGCTTCCTGAAGATAGTTATCTTGAGCAAGATGCGGAAATTCT
TGAAATTTTTGTCGAAGAAATTGAAGAAATCTTCGAAGAATTAAATCCATTATTTACAACTTGGTTTGCGAACCCAACAG
ATCAAGAAACTTTAGTAACTATTCGTCGTCACTTTCACACTTTAAAAGGCTCGGGTCGCATGGTGGGTGCGAAGTCTGCG
GGCGAGTTGGCATGGACGGTTGAAGATACTTTAAACCGTGTGCTTTCGGGTGCGGTAACACTCAATACTGATATTCAAAA
ATACGCAAAAACTGTTTTAAATATTTATCAATACAAGCTTTATCCAATTTTTAAGCAAGTCGGTTTAATTGATCTTGATT
TACGCCCATTGGTGCTTTTAGGACAACAATTACAGCAAAACCAAAGTCCTGAACCTGCATTGGAAGAGTTGCTGGTTTTA
GCAGATCAACTGACTGCCACTGATATGCCGACAGGACTAGAATTGACGGATGCTGCAGTTGAAACAGCAGCTGTCGCAGC
AGTTGAATCATCTGAAGATGTAATGACTGCTGAAGAAATGCCGCAGACAGAAGTTGCACAAGAAGAGGCTGCTGATGCGA
GTCTATTGGCTGAAACTCTGGCTATTTTTGTAGAAGAAGCTGAAGAGCATTTAGCGACCATTGATCAGTTCTTGGCACAA
GATCAGATTTACTCACAAGACTATAATGGCTTAATCCGTGCATTACATACACTGCGCGGCAGTTCGTCTATGGCGCAAAT
TGATCAAGTTTTTCAAGCCAGTTCTAAAGTTGAAAACTTGTTTAAAGCGTTTGTACAAGATGAAATTGAATCTACATCAA
AAGAAACTGCGCTGTTGGTGCAATATGCAGAATTTGTCCGGGATTATCTGCATGTACTTCGTCAAGGTCACTGTGATGGT
TTAGATGTAATCTATGCAACTTTTAATAAAGCATGGGATAGCTACGGCTTTAGCACCAGCGATACAGAAGACTCTAATCC
TCAAGGTTTAGTATCGAAGCTAATCGAACTGAATATTGATCGTTTACTTGATGCCGAATTTGAATTTGATAAATTGGCGC
AAGCGCAATTCCCAAGCTATTTAGAAGAACTCAGCGCACAAGCGCAATTGTTGGTAGAGCATACCGATAACCGTGCGTCT
GTGGGTATTCATCAATTTACTGAAGAACTTAAAGCTGCTTACGACAGTGTTTTAGCCAAACCAATTCTGCTTAACTCTGA
ATATGGTTATGAGTTATTTGCACAGGCACACCAAGAGTTTATTCATTTATTCGATACCTTGGCTGCGGGACAGCGTGTTA
CGGTTACAGAAGACATTCAGAAAACCTTAAATGACTTAACTGCATTTGTGCAGCAAGACATTGATGCAATTGCACTTGAA
GATGCTGAAACATCAGTGAGCGACAATGCTGTAGAAACAACAGTTGTTGCAGAACCTGAAGCGGTGCCTGCTGCAGTTGC
TAGCGAAAATTCGGGCACAGTGAATTTGGCGCAATTGTCACAACGTATTGCATCAGATCAACAAAACATGCATGCCGATG
ATGCCAACAAAGACTTCGATCCTGACTTGCTGGATATCTTCTTGGAAGAAGCAGAAGAGCTTTTGGTGGGTATGGATGAA
GATGTCAATACTTGGTCAAAAGACGCCAGCGATACTTCGGCTTTAAACAACTTAATGCGTTATTTGCACACTTTAAAAGG
TGGTGCAAATATGATTTCTGCGACGCATATTGGTTTAATTGCACACAACCTTGAGTCGATTTACGAGCGTATCATTAACA
ACCAAATTGTTGTTTCACCTGCGTTAATTCAAATTATTCGTTTGGTGCAAGATGATATTGCAGACCGTATTCAGACCATT
CGTGATGAGCGTGTGGACTATGCTGCGCCAGAGTCGATTGCAATTTTAGGCAACATTGTTAGCTTGGCACAAGGCGATGC
AGATGTGTCAGTTGCAAGTGCGACAACCGCAGCGCAGCCTGAACAGACTATTGAGGCAGTAGAAGAGGTTGATGCACAGC
CTGAGTTGGCGGTAGAAGCGTTGCAAGATACAACTGCAGATTTAGCTGAAGATGACGCAGTTATTGCTGATGATGCACAT
TTTGAAGACGCTGCTGCTGCGGCATTTGAGCCGATCACAGAAACTGTAAGTCTTGAAGCAAGTGCTGAATCTGAAGATGA
GCAATTACATTCAATTGTGGTTGAGACTTTCAGGGAAGAAGCGGAAGAAATTTTGGATGCTGCAGATCAGCGCTTGAAAC
AATGGTTTGAACAGCGTAGTGACCGAAGTATCTTGCTTCAATTACAACGTGCGGCGCACAGCTTAAAAGGCGGTGCACGT
ATGGCTGAAATTGAGTCTGTTGCGCAAATCGCCTATCAACTTGAAAGTGCCTTTGAACAGTTTGCTGTGCATCAATTTAA
CTCAAATGTTTATGATGCTTTATTGCAAACCACGTTGGCGTGGTTGCGTGATGCAATCTTCAAAGCAGATTACAGCAATT
ATGACAGCTTAAAATCTAGCTTGTCGGCGATGCAGTTTGTAGATGTATCTGCGCAATTGCCCGAGCGTTTAACGCATACC
GACTTGTTATCGCCAAGCCGTAGTTATGAGTTTGTTCAGGGTGATGGTACAGAGCCACCTGCAATGTCGGGTGAGTGGGG
CGAAACCACACAGCTGGATAATAGCAATGAGATGATTCGTATCTCTGCCGATTTAGTCGAGAAGATGATTGACTTGTCAG
GCGAGAACTCGATTAACCGTTCACGTATTGAAATGGAGCTTGGGCAACTAGGCGGTACGTTGAATGAGATGGAATTGGCG
ATTAAACGTCTTGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAATCGCAAATTATTGCCAAGCATGGTTCTGAAAA
CTCACGTTATGCAGACTTTGACCCATTAGAGATGGACCAATATTCATCGTTGAATCAGTTGTCTAAATCTCTGGCGGAAT
CTGCATCGGACTTGGTGGACTTTAAGAGCACCTTGGCTGAAAAAATTCGTGATGCCGAAGGTTTGTTATTACAACAATCA
CGTATTCAGGCTGAAATTCAAGAAAGCTTGATGCGTACACGCCTTGTACCATTCTCACGTTTATTGCCACGTTTACAACG
TATTGTGCGTCAGACTTCATCGACCTTAAACCGTCCGACAGAACTGGTGGTTTATAACACTGAAGGTGAATTAGACCGTA
CCATTCTAGAGCGTTTGGTGACACCGTTTGAACACATGCTGCGCAACGCGGTCGACCATGGGATTGAAGACCCTGCACAA
CGTGCTGCAGCCAATAAACCTGAAGTTGGTAAAATTGAACTGAACATTACCCGTCAAGGCACAGATGTTGTGGTGACTTT
TGTGGATGATGGTAAGGGTATTGATGATGCCAAGATTAAAGAAAAAGCATTGAGCTTAGGTTTAATCAAAGCCGATCAGA
ATTTAGATAAAAACGAAATTCTGCAATACATTTTCCACCCAGGCTTTACAACAGCACAATCGGTTACACAAATTTCAGGT
CGTGGCGTTGGTTTAGACGTGGTGCAAAGTGAGATTAAGGCGCTCGGCGGTCACGTTTCTGTAGATTCAACATTAGGTCA
AGGCACAACCTTTAGTATTCGTGTACCAACGACGGTTGCGGTATCCGATGCCTTAATGGTTAAAGTTGGTGATCAACAAT
TTGCTGTACCGTTGGCGCAAATTGACCGTATTGTACGTATTGCACCAACCACTTTGGAATCTTACTTCAACAGCAATGAA
GATTTCTTCCAAATTGACAACCAGAACTACAAGTTACGTTACTTATCTGAGTTCGTTGGCAATCAGCCATTACCGCGTTT
AAGCCATGTGGGTCATTCACTACCTGTTCTGTTAATTAAAGGCAGCACAGGTCAAACCATTGCTTTACTAGTCGATCAAT
TGATTGGTTCGCGTGGTCAAATTGTTGTGAAACCAATTGGACAACAGTTCTCAAGTATTGGTGCAATTGCAGGCGCAACC
ATTTTGGGTGATGGTCAAGTTTGTTTGATTTTGGATGGTCAGAACATTGCCCGTCAAATTCTTGCAACGCAACGTACCAA
ACAAGCCAGCGATCAACGTGATAGCCAACGTCGTGATACGCGCCGCTTAATTATGATCGTGGATGACTCAGTCACCGTAC
GTAAAGTAACTTCACGTCTGCTTGAGCGTCAAGGTTATGATATCGTGACTGCCAAAGATGGTGTCGATGCCATGGAGCAG
CTTGAAAACGTCAAACCTGACTTGATGTTACTGGATATTGAAATGCCACGTATGGATGGTTTTGAGGTGACTAACCTTGT
ACGCCACCACGACATGCATAGCAATCTGCCGATCATCATGATTACGTCACGTACAGGTGAAAAACACCGCGAACGAGCGT
TTAGCTTGGGTGTGACGCACTACATGGGTAAACCGTTCCAAGAGGCAGAATTGCTTGCCAATATTGAACAATTATTAGCA
GTTAGTCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.297

100

0.614