Detailed information NTG0054761

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SPJ2_RS07315
• Genome accession: NZ_ALWR01000004
• Coordinates: 25491..26408 (-)
• Length: 305 a.a.
• NCBI ID: WP_003107457.1
• Uniprot ID: A0ABP2SVA0
• Organism: Streptococcus parauberis KRS-02109
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 20491..31408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPJ2_RS07295 (SPJ2_1490)	-	21337..23115 (-)	1779	WP_003107454.1	acyltransferase family protein	-
SPJ2_RS07300 (SPJ2_1491)	-	23112..23513 (-)	402	WP_003105881.1	membrane protein	-
SPJ2_RS07305 (SPJ2_1492)	-	23542..23970 (-)	429	WP_003107455.1	low molecular weight protein-tyrosine-phosphatase	-
SPJ2_RS07310 (SPJ2_1493)	ruvB	24194..25192 (-)	999	WP_003107456.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SPJ2_RS10725	-	25327..25425 (-)	99	WP_199764314.1	quorum-sensing system DWW-type pheromone	-
SPJ2_RS07315 (SPJ2_1494)	comR	25491..26408 (-)	918	WP_003107457.1	helix-turn-helix transcriptional regulator	Regulator
SPJ2_RS07320 (SPJ2_1495)	purB	26525..27817 (-)	1293	WP_003107459.1	adenylosuccinate lyase	-
SPJ2_RS07325 (SPJ2_1496)	purK	27827..28912 (-)	1086	WP_003107461.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
SPJ2_RS07330 (SPJ2_1497)	purE	28899..29387 (-)	489	WP_003107462.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
SPJ2_RS07335 (SPJ2_1498)	purD	29595..30857 (-)	1263	WP_003107463.1	phosphoribosylamine--glycine ligase	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 35766.83 Da
• Isoelectric Point: 9.0707

>NTDB_id=54761 SPJ2_RS07315 WP_003107457.1 25491..26408(-) (comR) [Streptococcus parauberis KRS-02109]
MPELGDKIKAIRLGKKLTRESICGDETELSVRQLVRIEQNQSLPTLAKLVYLAKVLDIRLDKLINPKTISIPHDYLALKY
QIIRTPLYMNDQVMAIREGQFDAIFEKYYDYLPDEEKLIIDFLQSKFDVYQSGDANFGRPLLQDYIRQISKKKRYQINDI
FLIDLYLTCAIVSSFKAEFFDLDLYRRFLSKLLLMEKTLALSDLFLLNNVLLTCIDVGIRIGHFEVIQPALKASHRIMYK
VQDFQRLPIYCMHAWKNALFYTKSVKRGEDYFHQAQLFAKLIGDKNLEGKLAREWQKNLAESEKT

Nucleotide

• Length: 918 bp

>NTDB_id=54761 SPJ2_RS07315 WP_003107457.1 25491..26408(-) (comR) [Streptococcus parauberis KRS-02109]
ATGCCAGAGCTCGGGGATAAAATCAAAGCTATTCGACTGGGAAAAAAGTTAACTAGAGAGTCTATTTGCGGTGATGAGAC
AGAATTGTCTGTGCGTCAATTGGTACGAATTGAGCAAAATCAATCTCTGCCTACTCTTGCAAAATTAGTTTATCTTGCTA
AAGTTCTAGATATTAGACTTGATAAGTTAATTAACCCAAAAACAATTTCAATCCCACATGATTATCTTGCCCTTAAATAT
CAAATTATCCGGACACCGTTGTATATGAATGATCAAGTTATGGCAATTAGAGAAGGGCAGTTTGATGCTATTTTTGAAAA
GTACTATGACTATTTGCCAGATGAAGAAAAACTCATTATTGATTTTTTACAATCTAAATTTGATGTCTATCAAAGTGGAG
ATGCAAATTTTGGCCGTCCCCTCTTACAAGATTACATCAGACAAATCAGTAAGAAAAAACGCTATCAAATTAATGATATC
TTCTTAATTGATCTCTATTTAACCTGTGCGATTGTCAGTTCTTTTAAAGCTGAGTTTTTTGACTTGGACCTTTATCGTCG
CTTTCTGTCCAAGTTATTGTTAATGGAGAAGACATTAGCCTTAAGTGATTTATTCTTACTTAATAATGTCCTTTTAACCT
GTATTGATGTTGGTATTAGGATAGGTCATTTTGAAGTCATTCAACCGGCTTTAAAGGCAAGTCATCGCATTATGTACAAG
GTTCAAGATTTCCAACGCCTGCCAATTTACTGCATGCATGCCTGGAAAAATGCTCTTTTTTATACTAAGTCTGTAAAAAG
AGGAGAGGATTACTTTCATCAGGCGCAGCTATTTGCCAAATTGATTGGTGATAAAAATTTGGAAGGGAAATTAGCTCGTG
AATGGCAAAAAAATTTGGCAGAAAGTGAAAAAACATGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (72-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	45.819	98.033	0.449
comR	Streptococcus mutans UA159	42.617	97.705	0.416
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	43.902	94.098	0.413
comR	Streptococcus pyogenes MGAS8232	39.799	98.033	0.39
comR	Streptococcus suis P1/7	37.374	97.377	0.364
comR	Streptococcus suis 05ZYH33	37.374	97.377	0.364