Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   LO013_RS17110 Genome accession   NZ_CP087325
Coordinates   3518893..3519528 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain OC073     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3513893..3524528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LO013_RS17090 - 3513972..3514787 (+) 816 WP_000011163.1 DsbC family protein -
  LO013_RS17095 - 3515032..3516333 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  LO013_RS17100 thrC 3516389..3517528 (+) 1140 WP_000063593.1 threonine synthase -
  LO013_RS17105 pbpG 3517634..3518680 (-) 1047 WP_258578254.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  LO013_RS17110 letA 3518893..3519528 (+) 636 WP_000633799.1 response regulator Regulator
  LO013_RS17115 pilS 3519539..3521107 (+) 1569 WP_004737883.1 PAS domain-containing sensor histidine kinase Regulator
  LO013_RS17120 - 3521132..3522553 (+) 1422 WP_258578255.1 sigma-54 dependent transcriptional regulator -
  LO013_RS17125 - 3522557..3523741 (-) 1185 WP_004737879.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=545214 LO013_RS17110 WP_000633799.1 3518893..3519528(+) (letA) [Acinetobacter baumannii strain OC073]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=545214 LO013_RS17110 WP_000633799.1 3518893..3519528(+) (letA) [Acinetobacter baumannii strain OC073]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCCCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACCTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55