Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SCAZ3_RS03540 Genome accession   NZ_AIDX01000001
Coordinates   770340..770789 (-) Length   149 a.a.
NCBI ID   WP_003045511.1    Uniprot ID   A0A2D4DR43
Organism   Streptococcus canis FSL Z3-227     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 765340..775789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS03520 (SCAZ3_10545) - 765418..765864 (-) 447 WP_003045504.1 dUTP diphosphatase -
  SCAZ3_RS03525 (SCAZ3_10550) - 765970..766737 (-) 768 WP_003045505.1 epoxyqueuosine reductase QueH -
  SCAZ3_RS03530 (SCAZ3_10555) - 766854..768638 (-) 1785 WP_003045507.1 ABC transporter ATP-binding protein -
  SCAZ3_RS03535 (SCAZ3_10560) rcrP 768638..770347 (-) 1710 WP_003045509.1 ABC transporter ATP-binding protein Regulator
  SCAZ3_RS03540 (SCAZ3_10565) rcrR 770340..770789 (-) 450 WP_003045511.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SCAZ3_RS03545 (SCAZ3_10570) - 771089..772105 (+) 1017 WP_003045513.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  SCAZ3_RS03550 (SCAZ3_10575) galU 772137..773042 (+) 906 WP_003045515.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  SCAZ3_RS03555 (SCAZ3_10580) - 773305..773976 (-) 672 WP_003045516.1 rhomboid family intramembrane serine protease -
  SCAZ3_RS03560 (SCAZ3_10585) - 773973..774500 (-) 528 WP_039994714.1 5-formyltetrahydrofolate cyclo-ligase -
  SCAZ3_RS12545 - 775006..775155 (-) 150 WP_081587247.1 LPXTG cell wall anchor domain-containing protein -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17385.19 Da        Isoelectric Point: 9.6257

>NTDB_id=54320 SCAZ3_RS03540 WP_003045511.1 770340..770789(-) (rcrR) [Streptococcus canis FSL Z3-227]
MSRVIADLRELTHQIEQISDEIARKYNLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIQ
VLPSQADKRYKQIVLAQAGKDKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENNA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=54320 SCAZ3_RS03540 WP_003045511.1 770340..770789(-) (rcrR) [Streptococcus canis FSL Z3-227]
ATGTCACGAGTAATTGCAGATTTGCGCGAATTAACGCATCAGATTGAGCAAATTAGCGATGAAATTGCTAGGAAATACAA
TTTGGAACATTTAGCAGGTCCTCAGGGACATGTGTTGGTTTTTCTATCCAAACATCAAGATCAGGAAATCTTTGTCAAGG
ATATTGAAAAAGAACTGCAGATTTCAAAATCGGTCACTAGCAATTTAGTCAAGCGCATGGTCAAAAACGGCTTTATCCAA
GTACTTCCCTCGCAGGCTGACAAGCGCTATAAACAAATTGTTTTGGCTCAGGCGGGTAAGGATAAATTACCCTTGCTTCA
AGAATGTCGTAAGGATATTGAACATTATTTTTTTAAGGAAATTACGAGAGAAGAGTTGCTGACAGTCAAAAAGGTGATTC
AGCAGCTCAAGCAAAATATGCTAACTTACAAAGGAGAGAACAATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DR43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43