Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JS609_RS04515 Genome accession   NZ_CP071043
Coordinates   891124..891918 (+) Length   264 a.a.
NCBI ID   WP_213415021.1    Uniprot ID   -
Organism   Bacillus subtilis isolate ELA2001105     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 886124..896918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JS609_RS04485 (JS609_00886) sxzA 886965..887995 (+) 1031 Protein_833 FecCD family ABC transporter permease -
  JS609_RS04490 (JS609_00887) yfhB 888110..888991 (+) 882 WP_213415020.1 PhzF family phenazine biosynthesis isomerase -
  JS609_RS04495 (JS609_00888) yfhC 889079..889663 (+) 585 WP_003243940.1 nitroreductase -
  JS609_RS04500 (JS609_00889) yfhD 889701..889892 (-) 192 WP_038428644.1 YfhD family protein -
  JS609_RS04505 (JS609_00890) yfhE 889959..890069 (-) 111 WP_003223230.1 YfhE family protein -
  JS609_RS04510 (JS609_00891) yfhF 890124..891035 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  JS609_RS04515 (JS609_00892) recX 891124..891918 (+) 795 WP_213415021.1 recombination regulator RecX Regulator
  JS609_RS04520 (JS609_00893) yfhH 891920..892234 (+) 315 WP_003244592.1 YfhH family protein -
  JS609_RS04525 (JS609_00894) yfhI 892377..893570 (+) 1194 WP_072692836.1 MFS transporter -
  JS609_RS04530 (JS609_00895) sspK 893603..893755 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  JS609_RS04535 (JS609_00896) yfhJ 893880..894149 (+) 270 WP_003243789.1 YfhJ family protein -
  JS609_RS04540 (JS609_00897) yfhK 894294..894812 (+) 519 WP_032677434.1 SH3 domain-containing protein -
  JS609_RS04545 (JS609_00898) spdL 894897..895229 (+) 333 WP_032677433.1 SdpC immunity protein SpdL -
  JS609_RS04550 (JS609_00899) ephM 895216..896076 (+) 861 WP_003233547.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31019.24 Da        Isoelectric Point: 6.9997

>NTDB_id=542488 JS609_RS04515 WP_213415021.1 891124..891918(+) (recX) [Bacillus subtilis isolate ELA2001105]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDADTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=542488 JS609_RS04515 WP_213415021.1 891124..891918(+) (recX) [Bacillus subtilis isolate ELA2001105]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGCCGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

98.864

100

0.989