Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ICR96_RS03645 Genome accession   NZ_CP069606
Coordinates   685830..686024 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain CDC 2008724142     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 680830..691024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICR96_RS03620 (ICR96_03620) galT 680894..682417 (+) 1524 WP_205662294.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  ICR96_RS03625 (ICR96_03625) - 682460..683344 (-) 885 WP_016763035.1 NAD(P)-dependent oxidoreductase -
  ICR96_RS03630 (ICR96_03630) - 683547..683735 (-) 189 WP_013055400.1 YjzD family protein -
  ICR96_RS03635 (ICR96_03635) - 683946..684686 (+) 741 WP_013081744.1 hypothetical protein -
  ICR96_RS03640 (ICR96_03640) - 684868..685752 (+) 885 WP_016763037.1 NAD(P)-dependent oxidoreductase -
  ICR96_RS03645 (ICR96_03645) comZ 685830..686024 (+) 195 WP_013081746.1 ComZ family protein Regulator
  ICR96_RS03650 (ICR96_03650) - 686053..686253 (-) 201 WP_016763038.1 hypothetical protein -
  ICR96_RS03655 (ICR96_03655) - 686510..687448 (+) 939 WP_205662295.1 beta-ketoacyl-ACP synthase III -
  ICR96_RS03660 (ICR96_03660) fabF 687488..688729 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  ICR96_RS03665 (ICR96_03665) - 688836..689609 (+) 774 WP_205662296.1 DUF2268 domain-containing protein -
  ICR96_RS03670 (ICR96_03670) - 689836..690858 (+) 1023 WP_016763041.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=536102 ICR96_RS03645 WP_013081746.1 685830..686024(+) (comZ) [Priestia megaterium strain CDC 2008724142]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=536102 ICR96_RS03645 WP_013081746.1 685830..686024(+) (comZ) [Priestia megaterium strain CDC 2008724142]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563