Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JR311_RS08080 Genome accession   NZ_CP069391
Coordinates   1561034..1561630 (+) Length   198 a.a.
NCBI ID   WP_069473385.1    Uniprot ID   -
Organism   Bacillus velezensis strain Sam8H1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1556034..1566630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR311_RS08050 (JR311_08050) - 1556248..1556703 (+) 456 WP_094246983.1 flavodoxin -
  JR311_RS08055 (JR311_08055) dapD 1556785..1557495 (+) 711 WP_204530518.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JR311_RS08060 (JR311_08060) - 1557566..1558690 (+) 1125 WP_070081744.1 N-acetyldiaminopimelate deacetylase -
  JR311_RS08065 (JR311_08065) - 1558751..1558996 (+) 246 WP_003154596.1 YkuS family protein -
  JR311_RS08070 (JR311_08070) - 1559030..1559836 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  JR311_RS08075 (JR311_08075) - 1560125..1560583 (+) 459 WP_204530519.1 TlpA family protein disulfide reductase -
  JR311_RS08080 (JR311_08080) rok 1561034..1561630 (+) 597 WP_069473385.1 transcriptional regulator Rok Regulator
  JR311_RS08085 (JR311_08085) - 1561650..1562642 (-) 993 WP_165408991.1 sporulation protein -
  JR311_RS08090 (JR311_08090) - 1562788..1563390 (+) 603 WP_204530520.1 molybdenum cofactor guanylyltransferase -
  JR311_RS08095 (JR311_08095) - 1563442..1564461 (+) 1020 WP_077722145.1 molybdopterin-synthase adenylyltransferase MoeB -
  JR311_RS08100 (JR311_08100) glp 1564479..1565771 (+) 1293 WP_204530521.1 gephyrin-like molybdotransferase Glp -
  JR311_RS08105 (JR311_08105) mobB 1565732..1566253 (+) 522 WP_063174790.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22556.58 Da        Isoelectric Point: 9.6909

>NTDB_id=534368 JR311_RS08080 WP_069473385.1 1561034..1561630(+) (rok) [Bacillus velezensis strain Sam8H1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=534368 JR311_RS08080 WP_069473385.1 1561034..1561630(+) (rok) [Bacillus velezensis strain Sam8H1]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCAATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859