Detailed information NTG0053243

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: B739_RS05145
• Genome accession: NC_018609
• Coordinates: 1119268..1120371 (+)
• Length: 367 a.a.
• NCBI ID: WP_014938005.1
• Uniprot ID: J9R5B4
• Organism: Riemerella anatipestifer RA-CH-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1114268..1125371

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B739_RS05125 (B739_1045)	-	1114519..1117449 (-)	2931	WP_038693793.1	SusC/RagA family TonB-linked outer membrane protein	-
B739_RS05130 (B739_1046)	-	1117797..1118270 (+)	474	WP_038693795.1	Lrp/AsnC family transcriptional regulator	-
B739_RS05135 (B739_1047)	ruvC	1118323..1118877 (+)	555	WP_014938003.1	crossover junction endodeoxyribonuclease RuvC	-
B739_RS05140 (B739_1048)	-	1118888..1119265 (+)	378	WP_014938004.1	group III truncated hemoglobin	-
B739_RS05145 (B739_1049)	dprA	1119268..1120371 (+)	1104	WP_014938005.1	DNA-processing protein DprA	Machinery gene
B739_RS05150 (B739_1050)	gdhA	1120555..1121913 (+)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
B739_RS05155 (B739_1051)	-	1122045..1122695 (+)	651	WP_014938007.1	HD domain-containing protein	-
B739_RS05160 (B739_1052)	-	1122747..1123298 (+)	552	WP_014938008.1	hypothetical protein	-
B739_RS05170 (B739_1053)	comF	1123525..1124178 (+)	654	WP_038693798.1	ComF family protein	Machinery gene

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40200.07 Da
• Isoelectric Point: 6.6101

>NTDB_id=53243 B739_RS05145 WP_014938005.1 1119268..1120371(+) (dprA) [Riemerella anatipestifer RA-CH-1]
MVNAEEILYSIALRRSPLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILSNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPLVDVALTPVQKPIYDA
IKGGNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRKYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=53243 B739_RS05145 WP_014938005.1 1119268..1120371(+) (dprA) [Riemerella anatipestifer RA-CH-1]
ATGGTAAATGCAGAAGAAATTTTATATTCTATTGCTTTACGGCGAAGCCCTTTGGTGGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTAAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGGTTGGCACTAGGTACAGACGGGATAGCTCAT
CAAGAGGCTTTAAAAAATAACATAAAAACTTCAGCAGTTTTAGCACATGGTTTACATATTGTTTATCCGTCTAAACATAA
AATTCTTGCTGAAGAAATATTAAGTAATGGAGGAGCTTTGTTCTCTGAATTCTGCTCTGATGAAAAACCAGATAGAGAAC
ATTTTTTGCAAAGGAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCTGGCGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTCTTGCGGGGCGTCTTACTGATAAGTATAGCCA
AGGCTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTTAGTTGATGTCGCTTTAACTCCTGTTCAAAAACCTATTTATGATGCT
ATTAAAGGAGGTAATGATATTTCTTTAGATGACTTGTCAGAAAAATTAAATCAACCCATTTCTAAAGTGTTTCCAGTTTT
GTTAGAATTAGAATTATTGGGGTTGATAAGAGCAAATTCTGGGAGGAAATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-361)

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

3D structure

• AlphaFold DB: J9R5B4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	92.916	100	0.929