Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   K9C16_RS17985 Genome accession   NZ_CP082952
Coordinates   3744245..3744880 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain Cl300     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3739245..3749880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9C16_RS17965 (K9C16_17890) - 3739321..3740136 (+) 816 WP_029424462.1 DsbC family protein -
  K9C16_RS17970 (K9C16_17895) - 3740381..3741682 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  K9C16_RS17975 (K9C16_17900) thrC 3741738..3742877 (+) 1140 WP_000063596.1 threonine synthase -
  K9C16_RS17980 (K9C16_17905) pbpG 3742986..3744032 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  K9C16_RS17985 (K9C16_17910) letA 3744245..3744880 (+) 636 WP_000633799.1 response regulator Regulator
  K9C16_RS17990 (K9C16_17915) pilS 3744891..3746459 (+) 1569 WP_032050112.1 sensor histidine kinase Regulator
  K9C16_RS17995 (K9C16_17920) - 3746484..3747905 (+) 1422 WP_031963979.1 sigma-54-dependent transcriptional regulator -
  K9C16_RS18000 (K9C16_17925) - 3747909..3749093 (-) 1185 WP_000939111.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=531045 K9C16_RS17985 WP_000633799.1 3744245..3744880(+) (letA) [Acinetobacter baumannii strain Cl300]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=531045 K9C16_RS17985 WP_000633799.1 3744245..3744880(+) (letA) [Acinetobacter baumannii strain Cl300]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55