Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   K6973_RS06725 Genome accession   NZ_CP082206
Coordinates   1318770..1319249 (-) Length   159 a.a.
NCBI ID   WP_218654608.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain DY107     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1313770..1324249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS06710 (K6973_06710) fbp54 1314589..1316241 (+) 1653 WP_218654605.1 NFACT family protein -
  K6973_RS06715 (K6973_06715) - 1316302..1317549 (-) 1248 WP_218654606.1 tetratricopeptide repeat protein -
  K6973_RS06720 (K6973_06720) - 1317539..1318720 (-) 1182 WP_218654607.1 AI-2E family transporter -
  K6973_RS06725 (K6973_06725) mutX 1318770..1319249 (-) 480 WP_218654608.1 8-oxo-dGTP diphosphatase Machinery gene
  K6973_RS06730 (K6973_06730) - 1319445..1319636 (+) 192 WP_003058922.1 hypothetical protein -
  K6973_RS11310 - 1319726..1320451 (-) 726 WP_256867114.1 type II CAAX endopeptidase family protein -
  K6973_RS06740 (K6973_06740) rfbB 1320629..1321672 (-) 1044 WP_111716810.1 dTDP-glucose 4,6-dehydratase -
  K6973_RS06745 (K6973_06745) - 1321917..1322510 (-) 594 WP_218654609.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  K6973_RS06750 (K6973_06750) rfbA 1322510..1323379 (-) 870 WP_218654610.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18560.72 Da        Isoelectric Point: 4.2409

>NTDB_id=527463 K6973_RS06725 WP_218654608.1 1318770..1319249(-) (mutX) [Streptococcus dysgalactiae strain DY107]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDDESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=527463 K6973_RS06725 WP_218654608.1 1318770..1319249(-) (mutX) [Streptococcus dysgalactiae strain DY107]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGTGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTTCACGAAGGGAAGTGGATTTCAGTAGGAGGCAAGCTTGAAGCGGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGATGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACTTACAACGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686