Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   I6J14_RS07895 Genome accession   NZ_CP068057
Coordinates   1566397..1566492 (-) Length   31 a.a.
NCBI ID   WP_198455558.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1561397..1571492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS07875 (I6J14_07875) - 1562580..1564355 (-) 1776 WP_003049091.1 acyltransferase family protein -
  I6J14_RS07880 (I6J14_07880) - 1564352..1564753 (-) 402 WP_003049089.1 MORN repeat-containing protein -
  I6J14_RS07885 (I6J14_07885) - 1564782..1565213 (-) 432 WP_003049087.1 low molecular weight protein-tyrosine-phosphatase -
  I6J14_RS07890 (I6J14_07890) ruvB 1565348..1566346 (-) 999 WP_003049085.1 Holliday junction branch migration DNA helicase RuvB -
  I6J14_RS07895 (I6J14_07895) comS 1566397..1566492 (-) 96 WP_198455558.1 quorum-sensing system DWW-type pheromone Regulator
  I6J14_RS07900 (I6J14_07900) comR 1566579..1567490 (-) 912 WP_003049081.1 XRE family transcriptional regulator Regulator
  I6J14_RS07905 (I6J14_07905) purB 1567632..1568924 (-) 1293 WP_115252494.1 adenylosuccinate lyase -
  I6J14_RS07910 (I6J14_07910) purK 1568934..1570019 (-) 1086 WP_115252493.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  I6J14_RS07915 (I6J14_07915) purE 1570006..1570494 (-) 489 WP_003049074.1 5-(carboxyamino)imidazole ribonucleotide mutase -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3929.72 Da        Isoelectric Point: 10.1669

>NTDB_id=526745 I6J14_RS07895 WP_198455558.1 1566397..1566492(-) (comS) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MFKRYHYYFILTAMLAFKAAQMISQVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=526745 I6J14_RS07895 WP_198455558.1 1566397..1566492(-) (comS) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGTTCAAAAGATATCACTACTATTTTATACTTACTGCTATGTTGGCATTTAAAGCAGCTCAGATGATAAGTCAAGTGGA
TTGGTGGCGTTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

61.29

100

0.613
  comS Streptococcus pyogenes MGAS315

38.71

100

0.387