Detailed information NTG0522423

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: K4756_RS01615
• Genome accession: NZ_CP081458
• Coordinates: 295400..296521 (+)
• Length: 373 a.a.
• NCBI ID: WP_015382685.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ps4060
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290400..301521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K4756_RS01595 (K4756_01595)	-	291483..291614 (-)	132	WP_003246334.1	hypothetical protein	-
K4756_RS01600 (K4756_01600)	ycdB	291788..293209 (+)	1422	WP_015382683.1	YcdB/YcdC domain-containing protein	-
K4756_RS01605 (K4756_01605)	ycdC	293396..294757 (+)	1362	WP_046340299.1	YcdB/YcdC domain-containing protein	-
K4756_RS01610 (K4756_01610)	cwlK	294765..295277 (-)	513	WP_041517631.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
K4756_RS01615 (K4756_01615)	rapF	295400..296521 (+)	1122	WP_015382685.1	response regulator aspartate phosphatase RapJ	Regulator
K4756_RS01620 (K4756_01620)	ycdF	296629..297405 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
K4756_RS01625 (K4756_01625)	ycdG	297430..299115 (+)	1686	WP_015382687.1	glycoside hydrolase family 13 protein	-
K4756_RS01630 (K4756_01630)	znuA	299303..300262 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
K4756_RS01635 (K4756_01635)	znuC	300317..301012 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44444.30 Da
• Isoelectric Point: 4.7895

>NTDB_id=522423 K4756_RS01615 WP_015382685.1 295400..296521(+) (rapF) [Bacillus subtilis subsp. subtilis strain ps4060]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSADEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=522423 K4756_RS01615 WP_015382685.1 295400..296521(+) (rapF) [Bacillus subtilis subsp. subtilis strain ps4060]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGCCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGAGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGATGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (196-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405