Detailed information NTG0520091

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: K0V03_RS19820
• Genome accession: NZ_CP080508
• Coordinates: 3724225..3725214 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain HD15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3719225..3730214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K0V03_RS19805 (K0V03_19805)	acpP	3719422..3719655 (+)	234	WP_003154310.1	acyl carrier protein	-
K0V03_RS19810 (K0V03_19810)	rncS	3719795..3720544 (+)	750	WP_003232030.1	ribonuclease III	-
K0V03_RS19815 (K0V03_19815)	smc	3720645..3724205 (+)	3561	WP_085186073.1	chromosome segregation protein SMC	-
K0V03_RS19820 (K0V03_19820)	pilA	3724225..3725214 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
K0V03_RS19825 (K0V03_19825)	sivC	3725250..3725735 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
K0V03_RS19830 (K0V03_19830)	srpM	3725913..3726245 (+)	333	WP_021479302.1	putative DNA-binding protein	-
K0V03_RS19835 (K0V03_19835)	ffh	3726259..3727599 (+)	1341	WP_014113771.1	signal recognition particle protein	-
K0V03_RS19840 (K0V03_19840)	rpsP	3727705..3727977 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
K0V03_RS19845 (K0V03_19845)	khpA	3727977..3728222 (+)	246	WP_014476792.1	KH domain-containing protein	-
K0V03_RS19850 (K0V03_19850)	ylqD	3728344..3728730 (+)	387	WP_015715875.1	YlqD family protein	-
K0V03_RS19855 (K0V03_19855)	rimM	3728735..3729259 (+)	525	WP_003232013.1	ribosome maturation factor RimM	-
K0V03_RS19860 (K0V03_19860)	trmD	3729256..3729987 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=520091 K0V03_RS19820 WP_003232026.1 3724225..3725214(+) (pilA) [Bacillus subtilis strain HD15]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=520091 K0V03_RS19820 WP_003232026.1 3724225..3725214(+) (pilA) [Bacillus subtilis strain HD15]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACGACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCCCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCAGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCGAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAGGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401