Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | SA957_RS00345 | Genome accession | NC_022442 |
| Coordinates | 81084..81497 (+) | Length | 137 a.a. |
| NCBI ID | WP_000998780.1 | Uniprot ID | C1PH97 |
| Organism | Staphylococcus aureus subsp. aureus SA957 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 76084..86497
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA957_RS00325 (SA957_0063) | - | 76085..77371 (+) | 1287 | WP_000513494.1 | SIR2 family protein | - |
| SA957_RS00330 (SA957_0064) | - | 77377..79065 (+) | 1689 | WP_000555614.1 | ATP-binding protein | - |
| SA957_RS15035 (SA957_0065) | - | 79226..79363 (+) | 138 | WP_021758025.1 | hypothetical protein | - |
| SA957_RS00335 (SA957_0066) | - | 79626..80237 (+) | 612 | WP_000856594.1 | hypothetical protein | - |
| SA957_RS00340 (SA957_0067) | - | 80576..80983 (-) | 408 | WP_000173401.1 | hypothetical protein | - |
| SA957_RS00345 (SA957_0068) | lrpC | 81084..81497 (+) | 414 | WP_000998780.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| SA957_RS00350 (SA957_0069) | - | 81559..82032 (+) | 474 | WP_000455975.1 | GNAT family N-acetyltransferase | - |
| SA957_RS00355 (SA957_0070) | - | 82140..83126 (-) | 987 | WP_000662031.1 | tRNA dihydrouridine synthase | - |
| SA957_RS00360 (SA957_0071) | - | 83434..83637 (+) | 204 | WP_000389759.1 | DUF6007 family protein | - |
| SA957_RS00365 (SA957_0072) | - | 83686..83982 (+) | 297 | WP_000179901.1 | TfoX/Sxy family protein | - |
| SA957_RS00370 (SA957_0073) | - | 84044..85264 (-) | 1221 | WP_000130756.1 | MFS transporter | - |
| SA957_RS00375 (SA957_0074) | - | 85257..85808 (-) | 552 | WP_000627025.1 | flavodoxin family protein | - |
| SA957_RS00380 (SA957_0075) | - | 85921..86433 (+) | 513 | Protein_75 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15971.29 Da Isoelectric Point: 4.6692
>NTDB_id=51791 SA957_RS00345 WP_000998780.1 81084..81497(+) (lrpC) [Staphylococcus aureus subsp. aureus SA957]
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
Nucleotide
Download Length: 414 bp
>NTDB_id=51791 SA957_RS00345 WP_000998780.1 81084..81497(+) (lrpC) [Staphylococcus aureus subsp. aureus SA957]
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
43.284 |
97.81 |
0.423 |