Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   I6I02_RS01745 Genome accession   NZ_CP066093
Coordinates   349675..351915 (+) Length   746 a.a.
NCBI ID   WP_198463685.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 344675..356915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS01715 (I6I02_01715) - 344846..345961 (+) 1116 WP_198463681.1 hypothetical protein -
  I6I02_RS01720 (I6I02_01720) - 345974..346243 (-) 270 WP_008535312.1 GIY-YIG nuclease family protein -
  I6I02_RS01725 (I6I02_01725) - 346247..347011 (-) 765 WP_073950335.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  I6I02_RS01730 (I6I02_01730) - 347061..347996 (-) 936 WP_198463682.1 polysaccharide deacetylase family protein -
  I6I02_RS01735 (I6I02_01735) - 348127..348882 (+) 756 WP_198463683.1 lysophospholipid acyltransferase family protein -
  I6I02_RS01740 (I6I02_01740) comEA 348990..349685 (+) 696 WP_198463684.1 helix-hairpin-helix domain-containing protein Machinery gene
  I6I02_RS01745 (I6I02_01745) comEC/celB 349675..351915 (+) 2241 WP_198463685.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6I02_RS01750 (I6I02_01750) - 352001..353263 (+) 1263 WP_198463686.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  I6I02_RS01755 (I6I02_01755) - 353329..353874 (+) 546 WP_022496136.1 GNAT family N-acetyltransferase -
  I6I02_RS01760 (I6I02_01760) spxR 353867..355147 (+) 1281 WP_022496137.1 CBS-HotDog domain-containing transcription factor SpxR -
  I6I02_RS01765 (I6I02_01765) - 355187..356047 (+) 861 WP_004183173.1 methionyl aminopeptidase -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84354.07 Da        Isoelectric Point: 9.6868

>NTDB_id=517343 I6I02_RS01745 WP_198463685.1 349675..351915(+) (comEC/celB) [Streptococcus salivarius strain FDAARGOS_1045]
MWLKKAPISLFSLSLLIAALYFTIFVTNVYAIGAFVFLMVCFLKHHWKNKAALKLVGLVGSFFLVYFLFLHHRATIQDKQ
APVEINQVTLVADTLLVNGEQLSAIGKAKGQTYQVFYRLKSEKEQHFFKTTSQTLVLKGKINLSQATAQRNFQGFNYQSY
LASQGIYRIAQIERLDQVVPQKSLSPLAFFHQLRRRALVHIQTHFPSPMRHYMTGLLFGYLDKEFDEQSQLYTSLGIIHL
FALSGMQVGFFLGWFRYGLLRLGLPKDYLFIVLLPFSLCYGLMTGWTASVLRALVQSLLAEFGIKKLDNMGITLLLLFLL
LPHFLLTVGGVLSCSYAFLLCLFDFEDLSSLKKSIYTSLVLSLGILPFLTYYYGTFQPVSLILTAIFSIVFDSFLLPVLT
VFFALSGLVIFSQINSLFEWMESFLTWIQSWIGQPLILGKPSLFQFGLMIAVLVMLFDFWKKPQFRICLLMIFGLLMVWV
KHPLTNEVTVVDVGQGDSIFLRSMKGDTILIDVGGKVTFGTKEKWQESSQTSNAEKTLIPYLQARGVSQIDYLVLTHTDT
DHIGDLEEVAKCFKIKEICVSQGALTKSSFVKRLRTIKCPVHTLKAGDKLPMMGSNLQVLYPNKVGDGGNNDSIVLYGKL
LGSSFLFTGDLEKEGEEELMASYPTLRASVLKAGHHGSKGSSSEAFLNQLHPSLALVSAGENNRYKHPNDETIERFKQRH
IKILRTDKDGAIRFKGWFKWSSETVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=517343 I6I02_RS01745 WP_198463685.1 349675..351915(+) (comEC/celB) [Streptococcus salivarius strain FDAARGOS_1045]
ATGTGGCTTAAAAAAGCGCCAATCAGTCTTTTTTCCTTGTCTCTTTTAATAGCGGCCCTTTATTTTACGATTTTTGTCAC
TAATGTTTATGCTATTGGTGCTTTTGTCTTTCTTATGGTCTGTTTTTTGAAGCATCATTGGAAGAATAAGGCAGCCCTAA
AGTTGGTGGGACTTGTAGGTAGTTTCTTTTTGGTCTACTTTTTATTCTTGCACCACAGAGCTACTATACAAGATAAACAA
GCTCCTGTTGAAATCAATCAGGTGACTCTGGTTGCTGATACGCTATTGGTTAATGGTGAGCAATTATCCGCTATCGGTAA
GGCCAAGGGACAAACCTATCAGGTCTTTTACCGACTCAAATCTGAGAAGGAGCAGCATTTTTTCAAGACTACTAGCCAAA
CGTTGGTATTGAAGGGGAAAATAAACTTATCTCAAGCAACTGCTCAGCGTAATTTTCAAGGGTTTAATTATCAATCTTAT
CTAGCCAGTCAAGGCATTTATCGAATCGCTCAGATTGAGCGCTTGGACCAAGTGGTACCTCAAAAATCTCTATCTCCCCT
AGCTTTTTTCCATCAACTGAGGAGGAGGGCTTTGGTTCATATCCAGACGCACTTTCCTAGTCCTATGAGACACTATATGA
CAGGCCTGCTCTTTGGGTATTTGGATAAGGAGTTCGATGAGCAGAGCCAGCTTTACACAAGTTTAGGTATTATTCATCTA
TTCGCACTTTCGGGGATGCAAGTGGGCTTTTTTCTGGGATGGTTTCGCTACGGTCTCCTACGCTTAGGTCTTCCTAAAGA
TTATCTATTTATCGTCTTGCTGCCTTTTTCCTTATGTTATGGCCTAATGACAGGATGGACAGCTTCAGTCCTACGTGCCT
TGGTTCAAAGTTTGCTGGCTGAGTTTGGTATTAAAAAACTGGACAATATGGGAATAACCTTGCTTCTATTGTTTCTCTTG
TTACCTCATTTTCTCTTAACAGTGGGAGGTGTATTAAGTTGTTCCTATGCCTTCTTGTTGTGTTTGTTTGATTTTGAGGA
CTTGTCATCTTTAAAGAAATCAATCTATACGAGCTTGGTATTGAGTCTTGGGATTTTGCCCTTTCTAACTTACTATTATG
GAACCTTTCAACCAGTTAGTTTGATTCTCACTGCAATCTTTTCAATTGTATTTGATAGCTTTCTCTTGCCTGTCTTGACA
GTATTCTTTGCCCTCTCAGGACTGGTAATCTTTTCTCAAATCAACTCACTTTTTGAATGGATGGAGTCCTTTTTGACTTG
GATACAATCCTGGATAGGTCAACCTTTGATTTTAGGGAAACCTAGTTTGTTTCAGTTTGGCTTGATGATAGCAGTATTGG
TTATGCTCTTTGATTTTTGGAAAAAGCCTCAGTTTAGGATTTGTCTTTTGATGATTTTTGGACTTTTGATGGTCTGGGTC
AAACATCCTTTAACCAATGAGGTGACTGTGGTTGACGTTGGTCAGGGAGATAGTATTTTTCTGAGGAGTATGAAAGGCGA
TACCATCCTAATTGATGTGGGTGGCAAGGTGACGTTTGGAACTAAGGAAAAATGGCAAGAGTCTAGCCAGACGAGCAATG
CGGAGAAAACCTTGATTCCCTATCTACAGGCTAGAGGAGTGTCTCAAATTGATTATCTGGTCCTGACGCATACGGACACA
GATCATATTGGTGATTTGGAAGAAGTGGCCAAGTGTTTTAAGATTAAGGAAATCTGTGTCAGTCAGGGGGCTTTGACTAA
GTCTAGCTTTGTTAAAAGACTTCGGACTATAAAATGCCCAGTTCACACTCTAAAGGCTGGCGACAAATTACCCATGATGG
GAAGCAATCTACAGGTTCTTTATCCAAATAAAGTTGGTGATGGCGGTAACAATGATTCGATAGTTCTTTACGGAAAGCTA
TTAGGAAGCAGTTTTCTGTTTACCGGTGATTTGGAAAAAGAAGGAGAGGAGGAACTGATGGCCAGCTATCCAACTTTAAG
GGCAAGCGTCCTAAAAGCTGGACACCACGGTTCAAAAGGTTCTTCGTCTGAAGCTTTTTTGAACCAGCTGCACCCCTCCC
TTGCACTTGTTTCAGCTGGTGAGAACAATCGTTATAAACATCCAAATGATGAAACAATAGAACGTTTTAAGCAACGCCAC
ATTAAAATTTTACGAACAGATAAAGACGGAGCCATCCGTTTTAAGGGCTGGTTTAAATGGTCAAGTGAAACAGTCCGATA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

48.267

100

0.485

  comEC/celB Streptococcus mitis NCTC 12261

47.797

100

0.48

  comEC/celB Streptococcus pneumoniae Rx1

46.4

100

0.466

  comEC/celB Streptococcus pneumoniae D39

46.4

100

0.466

  comEC/celB Streptococcus pneumoniae R6

46.4

100

0.466

  comEC/celB Streptococcus pneumoniae TIGR4

46.061

100

0.462

  comEC Lactococcus lactis subsp. cremoris KW2

44.309

98.928

0.438