Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | I8T81_RS01730 | Genome accession | NZ_CP065820 |
| Coordinates | 366264..366707 (+) | Length | 147 a.a. |
| NCBI ID | WP_086497062.1 | Uniprot ID | - |
| Organism | Acinetobacter seifertii strain S21 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 361264..371707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I8T81_RS01710 (I8T81_01710) | - | 362660..363547 (+) | 888 | WP_198071988.1 | metal-dependent hydrolase | - |
| I8T81_RS01715 (I8T81_01715) | - | 363678..364268 (+) | 591 | WP_002051712.1 | LemA family protein | - |
| I8T81_RS01720 (I8T81_01720) | - | 364290..365369 (+) | 1080 | WP_198071989.1 | YgcG family protein | - |
| I8T81_RS01725 (I8T81_01725) | - | 365363..365923 (+) | 561 | WP_198071990.1 | TPM domain-containing protein | - |
| I8T81_RS01730 (I8T81_01730) | comP | 366264..366707 (+) | 444 | WP_086497062.1 | pilin | Machinery gene |
| I8T81_RS01735 (I8T81_01735) | - | 366832..368466 (+) | 1635 | WP_198071991.1 | O-antigen ligase | - |
| I8T81_RS01740 (I8T81_01740) | - | 368629..370257 (+) | 1629 | WP_198071992.1 | PglL family O-oligosaccharyltransferase | - |
| I8T81_RS01745 (I8T81_01745) | bfr | 370298..370762 (-) | 465 | WP_000678120.1 | bacterioferritin | - |
| I8T81_RS01750 (I8T81_01750) | - | 371007..371201 (-) | 195 | WP_004705220.1 | bacterioferritin-associated ferredoxin | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 15238.51 Da Isoelectric Point: 8.4476
>NTDB_id=514737 I8T81_RS01730 WP_086497062.1 366264..366707(+) (comP) [Acinetobacter seifertii strain S21]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTVIAENAGNGASSLVLGVPNFSPTDSVSTI
TPNATTGAIVISYTSKVKSIQLTLTPYDGGGTTALVAGTVPTNQITWKCTVATPADNNKYVPANCRS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTVIAENAGNGASSLVLGVPNFSPTDSVSTI
TPNATTGAIVISYTSKVKSIQLTLTPYDGGGTTALVAGTVPTNQITWKCTVATPADNNKYVPANCRS
Nucleotide
Download Length: 444 bp
>NTDB_id=514737 I8T81_RS01730 WP_086497062.1 366264..366707(+) (comP) [Acinetobacter seifertii strain S21]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAGGATTACATTGTCCGCTCAAAAGTAACAGAAGGTTTAAATCTAGCATCTTCTTATAAAACTGTAATTG
CTGAAAATGCAGGAAATGGTGCTTCAAGTTTAGTTTTAGGAGTGCCTAATTTTAGCCCAACAGATAGTGTTTCAACAATC
ACACCAAATGCTACTACAGGTGCAATTGTAATTAGTTACACAAGTAAAGTAAAAAGTATTCAACTTACTTTAACTCCTTA
TGATGGTGGTGGTACTACAGCATTAGTTGCAGGAACGGTTCCAACAAATCAAATTACTTGGAAGTGTACAGTCGCTACAC
CTGCGGACAATAATAAATATGTTCCAGCAAATTGCCGTAGCTAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAGGATTACATTGTCCGCTCAAAAGTAACAGAAGGTTTAAATCTAGCATCTTCTTATAAAACTGTAATTG
CTGAAAATGCAGGAAATGGTGCTTCAAGTTTAGTTTTAGGAGTGCCTAATTTTAGCCCAACAGATAGTGTTTCAACAATC
ACACCAAATGCTACTACAGGTGCAATTGTAATTAGTTACACAAGTAAAGTAAAAAGTATTCAACTTACTTTAACTCCTTA
TGATGGTGGTGGTACTACAGCATTAGTTGCAGGAACGGTTCCAACAAATCAAATTACTTGGAAGTGTACAGTCGCTACAC
CTGCGGACAATAATAAATATGTTCCAGCAAATTGCCGTAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
48.765 |
100 |
0.537 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.541 |
100 |
0.503 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
46.259 |
100 |
0.463 |
| pilA2 | Legionella pneumophila str. Paris |
46.259 |
100 |
0.463 |
| pilA | Acinetobacter baumannii strain A118 |
44.218 |
100 |
0.442 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.75 |
100 |
0.422 |
| pilA | Pseudomonas aeruginosa PAK |
37.423 |
100 |
0.415 |
| pilE | Neisseria gonorrhoeae MS11 |
36.076 |
100 |
0.388 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.241 |
98.639 |
0.367 |