Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KV381_RS10195 Genome accession   NZ_CP079114
Coordinates   2356059..2357792 (+) Length   577 a.a.
NCBI ID   WP_030622149.1    Uniprot ID   -
Organism   Streptomyces sp. WY228     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2351059..2362792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV381_RS10160 (KV381_10160) - 2351095..2352015 (-) 921 WP_193463914.1 NAD(P)H-binding protein -
  KV381_RS10165 (KV381_10165) - 2352012..2353136 (-) 1125 WP_030078069.1 FAD-binding oxidoreductase -
  KV381_RS10185 (KV381_10185) - 2354053..2354361 (+) 309 WP_030078067.1 hypothetical protein -
  KV381_RS10190 (KV381_10190) - 2354429..2355880 (+) 1452 WP_030622152.1 FGGY family carbohydrate kinase -
  KV381_RS10195 (KV381_10195) rcrP 2356059..2357792 (+) 1734 WP_030622149.1 ABC transporter ATP-binding protein Regulator
  KV381_RS10200 (KV381_10200) rcrQ 2357792..2359720 (+) 1929 WP_030622146.1 ABC transporter ATP-binding protein Regulator
  KV381_RS10205 (KV381_10205) rpoS 2359736..2360827 (-) 1092 WP_030078059.1 RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62308.35 Da        Isoelectric Point: 5.2565

>NTDB_id=514176 KV381_RS10195 WP_030622149.1 2356059..2357792(+) (rcrP) [Streptomyces sp. WY228]
MLIKLLRAHLGPYKKPIVLLVCLQLLQTCATLYLPSLNADIIDNGVVTGDTGYILEFGGLMIAVSVLQVLCNVGAVYYGA
RTASALGRDVRAAVFDRVQSFSARELGRFGAPSLITRTTNDVQQVQMVVLLAFTLMVSAPIMCVGGIVMALGLDVPLSTV
LLAVVPVLGVSVGLIVRKMGPLFRTMQERLDGVNRVLREQITGNRVIRAFVRDGYEEKRFRGANTELTDVSVATGRLMAL
MFPTVMTVVNLSSVAVVWFGAHRIDSGGMQIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIEEVLGTESSVVP
PVAPVTELRRHGHLEVRGAEFRYPGAEEPVLRNVDLVARPGETTAVIGSTGSGKSTLLGLVPRLFDVTDGEVLVDGEDVR
TLDPVLLSKTVSLVPQKPYLFSGTVATNLRYGNPDASDEELWHALEVAQAKEFVEALEHGLDAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALGRETAGATVVIVAQRVSTIRDADRILVLDEGRLVGSGTHHELMEGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=514176 KV381_RS10195 WP_030622149.1 2356059..2357792(+) (rcrP) [Streptomyces sp. WY228]
GTGCTCATAAAACTCCTGCGGGCCCATCTGGGCCCGTACAAGAAACCCATCGTGCTGCTGGTCTGTCTCCAGCTGCTCCA
GACCTGCGCCACCCTGTATCTGCCCAGCCTGAACGCCGACATCATCGACAACGGTGTCGTCACCGGTGACACCGGCTACA
TCCTGGAGTTCGGCGGTCTCATGATCGCCGTCAGTGTTCTGCAGGTCCTCTGCAACGTGGGGGCCGTCTATTACGGGGCG
CGTACCGCCTCCGCTCTCGGGCGTGACGTGCGGGCCGCCGTCTTCGACCGGGTGCAGTCCTTCTCCGCCCGTGAGCTGGG
CCGGTTCGGGGCGCCCTCGCTGATCACCCGGACCACCAACGACGTCCAGCAGGTCCAGATGGTGGTGCTGCTGGCGTTCA
CGCTGATGGTGTCGGCCCCGATCATGTGCGTCGGCGGCATCGTCATGGCGCTCGGCCTGGATGTGCCGCTCTCCACCGTG
CTGCTGGCGGTCGTGCCGGTGCTCGGGGTCTCGGTCGGTCTCATCGTGCGGAAGATGGGGCCGCTGTTCCGCACCATGCA
GGAGCGGCTGGACGGCGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTCATCCGCGCCTTCGTCCGGGACG
GGTACGAGGAGAAGCGGTTCCGGGGTGCGAACACCGAGCTGACCGATGTGTCGGTGGCGACCGGGCGGCTGATGGCGCTG
ATGTTCCCGACCGTGATGACGGTGGTCAACCTGTCGTCGGTCGCGGTGGTGTGGTTCGGCGCGCACCGGATCGACAGCGG
CGGGATGCAGATCGGTGCGCTGACCGCGTTCCTCGCCTATCTGATGCAGATCGTGATGGCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCGAGGAGGTCCTCGGGACCGAGTCGAGCGTCGTGCCG
CCCGTCGCGCCCGTCACCGAGCTGCGGCGGCACGGGCATCTGGAGGTGCGGGGCGCGGAGTTCCGATATCCGGGTGCGGA
GGAGCCGGTGCTGCGGAACGTCGACCTGGTGGCGCGGCCCGGGGAGACCACCGCGGTCATCGGGTCCACAGGCAGCGGGA
AGTCCACACTGCTCGGGCTCGTACCCCGGCTGTTCGATGTGACGGACGGCGAGGTGCTGGTCGACGGCGAGGACGTGCGG
ACGCTGGATCCGGTGCTGCTGTCGAAGACGGTGTCGCTGGTGCCGCAGAAGCCGTACCTCTTCTCGGGGACGGTGGCGAC
GAACCTGCGGTACGGGAACCCGGACGCGAGCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCACAGGCGAAGGAGTTCG
TGGAGGCCCTGGAGCACGGGCTGGACGCGCCGATCGCGCAGGGCGGCACCAATGTGTCGGGCGGTCAGCGGCAGCGGCTC
GCCATCGCGCGGACGCTGGTGCAGCGCCCGGAGATCTATCTGTTCGACGACTCGTTCTCCGCGCTGGACTACGCGACCGA
CGCGGCGCTGCGGGCGGCGCTGGGCCGGGAGACGGCCGGGGCGACCGTGGTGATCGTGGCGCAGCGGGTGTCCACCATCC
GTGACGCGGACCGGATCCTGGTGCTGGACGAGGGCCGGCTCGTGGGGTCCGGCACCCATCACGAGCTGATGGAAGGCAAT
GAAACGTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.927

100

0.39