Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   I6G80_RS08375 Genome accession   NZ_CP065647
Coordinates   1583746..1583886 (+) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus licheniformis strain FDAARGOS_923     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1578746..1588886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G80_RS08350 (I6G80_08350) - 1578847..1579248 (+) 402 WP_003184870.1 YueI family protein -
  I6G80_RS08355 (I6G80_08355) - 1579433..1579984 (+) 552 WP_003184868.1 cysteine hydrolase family protein -
  I6G80_RS08360 (I6G80_08360) - 1580002..1581471 (+) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  I6G80_RS08365 (I6G80_08365) - 1581650..1582870 (+) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  I6G80_RS08370 (I6G80_08370) - 1582913..1583260 (-) 348 WP_009329512.1 hypothetical protein -
  I6G80_RS08375 (I6G80_08375) degQ 1583746..1583886 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  I6G80_RS08380 (I6G80_08380) - 1584075..1584944 (+) 870 WP_011198252.1 polyprenyl synthetase family protein -
  I6G80_RS08385 (I6G80_08385) comX 1584959..1585123 (+) 165 WP_011198251.1 competence pheromone ComX -
  I6G80_RS08390 (I6G80_08390) - 1585163..1586362 (+) 1200 WP_227601289.1 PDZ domain-containing protein -
  I6G80_RS08395 (I6G80_08395) - 1586384..1587546 (+) 1163 WP_085959889.1 IS3 family transposase -
  I6G80_RS08400 (I6G80_08400) - 1587586..1588773 (+) 1188 Protein_1541 sensor histidine kinase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=512524 I6G80_RS08375 WP_003184860.1 1583746..1583886(+) (degQ) [Bacillus licheniformis strain FDAARGOS_923]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=512524 I6G80_RS08375 WP_003184860.1 1583746..1583886(+) (degQ) [Bacillus licheniformis strain FDAARGOS_923]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATCTAAAAACCTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652