Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   KU540_RS07700 Genome accession   NZ_CP077894
Coordinates   1511045..1512034 (+) Length   329 a.a.
NCBI ID   WP_225806074.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 329     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1506045..1517034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU540_RS07675 (KU540_07625) - 1506811..1507302 (+) 492 WP_000383814.1 DUF948 domain-containing protein -
  KU540_RS07680 (KU540_07630) - 1507376..1508740 (+) 1365 WP_111187418.1 hypothetical protein -
  KU540_RS07685 (KU540_07635) - 1508875..1508979 (+) 105 WP_031874968.1 hypothetical protein -
  KU540_RS07690 (KU540_07640) - 1509434..1510525 (+) 1092 WP_000066379.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  KU540_RS07695 (KU540_07645) - 1510860..1510972 (+) 113 Protein_1472 hypothetical protein -
  KU540_RS07700 (KU540_07650) ccpA 1511045..1512034 (+) 990 WP_225806074.1 catabolite control protein A Regulator
  KU540_RS07705 (KU540_07655) - 1512133..1513302 (-) 1170 WP_001184009.1 acetoin utilization protein AcuC -
  KU540_RS07710 (KU540_07660) - 1513327..1513959 (-) 633 WP_111187420.1 N-acetyltransferase -
  KU540_RS07715 (KU540_07665) acsA 1514128..1515834 (+) 1707 WP_000862077.1 acetate--CoA ligase -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36017.21 Da        Isoelectric Point: 5.5023

>NTDB_id=510109 KU540_RS07700 WP_225806074.1 1511045..1512034(+) (ccpA) [Staphylococcus aureus strain 329]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLAGLTEVLDKNGLQLGDALNCTGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDASIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=510109 KU540_RS07700 WP_225806074.1 1511045..1512034(+) (ccpA) [Staphylococcus aureus strain 329]
ATGACAGTTACTATATATGATGTAGCAAGGGAAGCACGTGTTTCAATGGCCACTGTATCACGTGTTGTTAATGGGAACCA
GAATGTTAAAGCAGAGACAAAAAATAAAGTTAACGAAGTTATCAAGCGATTGAATTACCGTCCAAATGCTGTTGCCAGAG
GTCTAGCAAGCAAAAAGACGACAACAGTAGGTGTGATTATCCCTGATATTTCAAATATCTATTACTCACAACTAGCAAGA
GGGCTTGAAGATATTGCAACAATGTACAAATATCATTCAATTATTTCTAACTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTTGTATCAGGAACTAATGGTAAGGATGCACATATAGCATCTGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAGTTAATTGAAAAAGGCGCTAAATCATTTGCATTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGACGTTTTAGCAGGTTTAACTGAAGTGTTAGATAAAAATGGTCTTCAATTAGGCGATGCAT
TAAATTGTACAGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCTAAAATGAAAGGTAATCTTCCAGATGCTATA
TTATGTATCAGTGACGAAGAAGCTATTGGTATCATGCATAGTGCAATGGATGCTAGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGCTTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGAATGCGCTTACTTACTAAATATATGAACGATGAAAAGATAGAAGAACCGAATGTAGTTTTACCACAC
AGAATTGAATATCGTGGCACAACAAAATAA

Domains

Predicted by InterProScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)

Bacterial regulatory proteins, lacI family (LacI)

(4-49)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.576

100

0.477
  ccpA Streptococcus gordonii str. Challis substr. CH1

46.809

100

0.468
  ccpA Streptococcus pneumoniae D39

45.897

100

0.459