Detailed information NTG0510108

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ST90728_RS01480
• Genome accession: NZ_CP065479
• Coordinates: 267300..268199 (+)
• Length: 299 a.a.
• NCBI ID: WP_347114255.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 90728
• Function: activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 262300..273199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ST90728_RS01460 (ST90728_01460)	trkA	263437..264786 (-)	1350	WP_011225444.1	Trk system potassium transporter TrkA	-
ST90728_RS01465 (ST90728_01465)	-	265075..265584 (+)	510	WP_011680717.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
ST90728_RS01470 (ST90728_01470)	-	265895..266452 (+)	558	WP_024704183.1	ECF transporter S component	-
ST90728_RS01475 (ST90728_01475)	-	266455..267105 (+)	651	WP_011225447.1	phosphatase PAP2 family protein	-
ST90728_RS01480 (ST90728_01480)	comR	267300..268199 (+)	900	WP_347114255.1	XRE family transcriptional regulator	Regulator
ST90728_RS01485 (ST90728_01485)	-	268437..269615 (+)	1179	Protein_239	ABC transporter transmembrane domain-containing protein	-
ST90728_RS01490	comA	269637..269846 (+)	210	WP_002946147.1	hypothetical protein	Regulator
ST90728_RS01495 (ST90728_01500)	-	269901..270469 (+)	569	Protein_241	ATP-binding cassette domain-containing protein	-
ST90728_RS01500	-	270700..270894 (+)	195	WP_347114257.1	hypothetical protein	-
ST90728_RS01505	-	271110..271457 (-)	348	WP_333781103.1	DUF4153 domain-containing protein	-
ST90728_RS01510	-	271382..272278 (-)	897	WP_347114259.1	urease cluster protein	-
ST90728_RS01515 (ST90728_01515)	-	272681..273196 (+)	516	WP_002949547.1	AmiS/UreI family transporter	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35302.78 Da
• Isoelectric Point: 5.2252

>NTDB_id=510108 ST90728_RS01480 WP_347114255.1 267300..268199(+) (comR) [Streptococcus thermophilus strain 90728]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLNRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL

Nucleotide

• Length: 900 bp

>NTDB_id=510108 ST90728_RS01480 WP_347114255.1 267300..268199(+) (comR) [Streptococcus thermophilus strain 90728]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAAATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GCTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGGAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTCATAGAAAAATCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-292)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus thermophilus LMG 18311	99.666	100	0.997
comR	Streptococcus thermophilus LMD-9	98.997	100	0.99
comR	Streptococcus salivarius strain HSISS4	94.983	100	0.95
comR	Streptococcus salivarius SK126	94.314	100	0.943
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421