Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   KU540_RS07125 Genome accession   NZ_CP077894
Coordinates   1402142..1402882 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 329     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1397142..1407882
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU540_RS07100 (KU540_07060) yhaM 1397559..1398500 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  KU540_RS07105 (KU540_07065) - 1398621..1399583 (-) 963 WP_000782119.1 foldase protein PrsA -
  KU540_RS07110 (KU540_07070) - 1399788..1400345 (-) 558 WP_000477957.1 DUF3267 domain-containing protein -
  KU540_RS07115 (KU540_07075) - 1401079..1401444 (-) 366 WP_225806080.1 YtxH domain-containing protein -
  KU540_RS07120 (KU540_07080) - 1401586..1402008 (-) 423 WP_000004981.1 HIT family protein -
  KU540_RS07125 (KU540_07085) pptA 1402142..1402882 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  KU540_RS07130 (KU540_07090) ecsB 1402875..1404098 (+) 1224 WP_001245753.1 ABC transporter permease EcsB -
  KU540_RS07135 (KU540_07095) traP 1404223..1404726 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  KU540_RS07140 (KU540_07100) - 1404912..1404998 (+) 87 WP_031875110.1 hypothetical protein -
  KU540_RS07145 (KU540_07105) hemE 1404988..1406025 (+) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  KU540_RS07150 (KU540_07110) hemH 1406082..1407005 (+) 924 WP_000162875.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=510108 KU540_RS07125 WP_000216874.1 1402142..1402882(+) (pptA) [Staphylococcus aureus strain 329]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=510108 KU540_RS07125 WP_000216874.1 1402142..1402882(+) (pptA) [Staphylococcus aureus strain 329]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATATACGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTTCTTGGCTTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545