Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC   Type   Machinery gene
Locus tag   IXY24_RS06255 Genome accession   NZ_CP064845
Coordinates   1193414..1195762 (+) Length   782 a.a.
NCBI ID   WP_154303200.1    Uniprot ID   A0A6A8LFA2
Organism   Bacillus velezensis strain BZR 277     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1188414..1200762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IXY24_RS06215 (IXY24_06140) yhbY 1188686..1188976 (+) 291 WP_003152858.1 ribosome assembly RNA-binding protein YhbY -
  IXY24_RS06220 (IXY24_06145) - 1188987..1189556 (+) 570 WP_003152860.1 nicotinate-nucleotide adenylyltransferase -
  IXY24_RS06225 (IXY24_06150) yqeK 1189546..1190127 (+) 582 WP_063174743.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  IXY24_RS06230 (IXY24_06155) rsfS 1190124..1190480 (+) 357 WP_003152864.1 ribosome silencing factor -
  IXY24_RS06235 (IXY24_06160) - 1190477..1191214 (+) 738 WP_014305450.1 class I SAM-dependent methyltransferase -
  IXY24_RS06240 (IXY24_06165) comER 1191283..1192104 (-) 822 WP_014305449.1 late competence protein ComER -
  IXY24_RS06245 (IXY24_06170) comEA 1192163..1192777 (+) 615 WP_015387983.1 helix-hairpin-helix domain-containing protein Machinery gene
  IXY24_RS06250 (IXY24_06175) - 1192844..1193413 (+) 570 WP_003152868.1 ComE operon protein 2 -
  IXY24_RS06255 (IXY24_06180) comEC 1193414..1195762 (+) 2349 WP_154303200.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  IXY24_RS06260 (IXY24_06185) - 1195781..1195915 (-) 135 WP_003152870.1 YqzM family protein -
  IXY24_RS06265 (IXY24_06190) - 1195956..1196110 (+) 155 Protein_1222 hypothetical protein -
  IXY24_RS06270 (IXY24_06195) holA 1196150..1197191 (+) 1042 Protein_1223 DNA polymerase III subunit delta -
  IXY24_RS06275 (IXY24_06200) rpsT 1197208..1197474 (-) 267 WP_003152876.1 30S ribosomal protein S20 -
  IXY24_RS06280 (IXY24_06205) gpr 1197677..1198783 (+) 1107 WP_003152878.1 GPR endopeptidase -
  IXY24_RS06285 (IXY24_06210) spoIIP 1198851..1200044 (+) 1194 WP_063174745.1 stage II sporulation protein P -
  IXY24_RS06290 (IXY24_06215) - 1200061..1200399 (+) 339 WP_003152882.1 YqxA family protein -

Sequence


Protein


Download         Length: 782 a.a.        Molecular weight: 86622.59 Da        Isoelectric Point: 9.1033

>NTDB_id=505191 IXY24_RS06255 WP_154303200.1 1193414..1195762(+) (comEC) [Bacillus velezensis strain BZR 277]
MKYKYLLLPLAAVSATAGIAAAHVFWVLLLFLLYLLFIMIKTKQPAPVIICLVSFCVYFFLYTVCDAVNVTRYQAGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKRRIEQLEPGMRCTFTGSLEQPAHATIPGGFDYKEYLYSQQI
HWLFTVTSIQQCEKSKQPLFKLLSIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGILLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNPY
LLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLASFPMNMVMVPFYTLFVIPVS
VIGFLLLLLSRQMGECLFNMFDLVMKPVHDFITYAASVDLFTMIVLKPDFLSLLLLAVSVFTLFAALEKGGFLKLRKSAL
FFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFINAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGKG
VKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSPE
SSDGKSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPKLKADILKAGHHGSKSSTSEAFLKQLQPEAALISAGKE
NRYHHPHEEVLDRLKAYSVNVLRTDISGTIQYRFEKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=505191 IXY24_RS06255 WP_154303200.1 1193414..1195762(+) (comEC) [Bacillus velezensis strain BZR 277]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGGATTGCCGCCGCTCATGTCTTCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATGATAAAAACAAAGCAGCCTGCTCCGGTTATCATCTGCCTCGTTT
CTTTTTGTGTTTATTTCTTTCTTTATACGGTTTGTGACGCTGTGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTACAAAATCCGGTCTCTTGAAGAAAAGAGACGCATTGAACAGCTTGAACCGGGGATGCGCTGCACATTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTACCGTGACTTCCATTCAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAGCATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAAGACGATATACTGAGTGCATATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATAACGGCGGGATTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAGGCGGGGATATTGCTGCTGTT
TTTACCGGTGTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCGCCG
GAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCTCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCTTAC
CTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAAAGC
AGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTCATTGCAGAGCTCAGCTCACTTCCGTTTCTTCTCTATCATT
TTCAGCAAATTTCACTTGCCAGTTTTCCGATGAATATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGGTTTCT
GTCATCGGTTTCCTTCTTCTTTTACTTTCAAGGCAGATGGGAGAATGTTTGTTTAATATGTTTGACCTTGTGATGAAGCC
TGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTTAAAGCCTGACTTTCTTTCCCTTC
TTCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTAGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCTCTT
TTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGCCCATGGGGAGAAGCGGATATGCTTGATATCGG
GCAGGGAGACTCGCTGTTTATAAACGCGCCGCACCGCAAAGGGACCGTAATGGTTGATACAGGGGGAGTGATTGCTTATC
CCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAAGGG
GTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAGGATCACATCGGGGAAGCCGGAGTGTTAATCAAAAATCA
TAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAGGATCAGAACATATTAAATATGGCGAAAGAAA
ACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCGGAG
TCGTCTGACGGAAAGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGACGGG
AGATTTAGAATCGGACGGCGAAACAGAAGTGCTGAAAACGTATCCGAAACTGAAGGCTGATATATTGAAGGCGGGTCATC
ACGGCAGCAAAAGCTCAACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAAGAG
AATCGATACCATCATCCGCACGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATATCAG
CGGAACGATTCAATACAGATTTGAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCAGGG
CGCAAGAAGTAAAAAAGACTGCCGATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6A8LFA2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Bacillus subtilis subsp. subtilis str. 168

56.088

98.721

0.554