Detailed information NTG0504110

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: KRG72_RS09255
• Genome accession: NZ_CP076703
• Coordinates: 1869877..1870971 (+)
• Length: 364 a.a.
• NCBI ID: WP_258255308.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain S1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1864877..1875971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KRG72_RS09230 (KRG72_09230)	pgsA	1865287..1865841 (-)	555	WP_258255305.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
KRG72_RS09235 (KRG72_09235)	-	1865854..1866804 (-)	951	WP_074869644.1	helix-turn-helix domain-containing protein	-
KRG72_RS09240 (KRG72_09240)	yfmH	1866870..1868159 (-)	1290	WP_258255306.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
KRG72_RS09245 (KRG72_09245)	yfmF	1868160..1869404 (-)	1245	WP_006531474.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
KRG72_RS09250 (KRG72_09250)	yaaA	1869491..1869874 (+)	384	WP_258255307.1	S4 domain-containing protein YaaA	-
KRG72_RS09255 (KRG72_09255)	recF	1869877..1870971 (+)	1095	WP_258255308.1	DNA replication/repair protein RecF	Machinery gene
KRG72_RS09260 (KRG72_09260)	-	1871037..1871903 (-)	867	WP_258255309.1	GRP family sugar transporter	-
KRG72_RS09265 (KRG72_09265)	guaB	1872148..1873629 (-)	1482	WP_133017769.1	IMP dehydrogenase	-
KRG72_RS09270 (KRG72_09270)	trpS	1873855..1874877 (-)	1023	WP_258255311.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42073.35 Da
• Isoelectric Point: 7.6904

>NTDB_id=504110 KRG72_RS09255 WP_258255308.1 1869877..1870971(+) (recF) [Streptococcus equinus strain S1]
MWIQKIALKNYRNYLTNELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRLDKELIHFQEKELRVSGILQRSTGT
VPLEINLSSKGRVTRVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NTYLKTAEKVDIDFLAVLDEQLADFGSRVMEHRLDFVSNLEKEADRYHHAISNGLEHLKIRYLSSVPFQEKSEIKEYFLK
TLEKNRKRDIFKKNTGAGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKNVTGDYPILLLDDVMSELDNYRQ
TELLKMIIAENVQTFITTTSLEHLSKLPEELKIFTVNQGTIEEN

Nucleotide

• Length: 1095 bp

>NTDB_id=504110 KRG72_RS09255 WP_258255308.1 1869877..1870971(+) (recF) [Streptococcus equinus strain S1]
ATGTGGATTCAAAAAATAGCCTTAAAAAATTATCGCAATTATTTAACCAATGAGCTTGAATTTTCTCCCGGGCTAAATGT
CTTTATCGGGAAAAATGCCCAAGGAAAAACTAATTTCTTAGAAGCTATTTATTTCTTATCTTTAACACGTAGCCACCGTA
CACGCTTAGACAAAGAGCTGATTCATTTTCAAGAAAAAGAACTCCGCGTCTCAGGTATTCTGCAACGCTCAACTGGGACA
GTTCCTTTGGAAATCAATCTATCAAGTAAAGGACGAGTCACTAGAGTTAATCACCTCAAACAAGCTAAATTATCCGACTA
CATCGGAGTGATGACAGTCGTCTTATTTGCACCTGAAGATTTACAACTTATCAAAGGAGCACCTAGCCTCCGTCGTAAGT
TTATTGATATTGATTTAGGGCAAATCAAGCCGGTCTACCTCTCTGATTTGTCTAATTACAATCATGTCCTTAAACAACGT
AACACTTACCTAAAAACCGCTGAAAAAGTTGACATCGACTTTTTAGCAGTCCTTGATGAGCAATTAGCTGATTTTGGTAG
CCGCGTCATGGAACATCGCTTAGATTTCGTCTCTAATCTCGAAAAAGAAGCCGACCGCTATCACCATGCCATCTCTAATG
GCCTAGAACATTTAAAAATTCGCTATCTATCATCTGTGCCATTCCAAGAAAAAAGTGAAATCAAAGAATACTTCTTAAAA
ACATTGGAAAAGAATCGCAAACGTGATATCTTCAAAAAAAATACTGGTGCTGGACCTCATCGTGATGATTTAGAGTTTTT
CATCAACGATATGCCTGCCAATTTTGGTAGCCAAGGACAACACCGAAGTTTGATTTTATCTCTTAAAATGGCTGAAATTG
AACTCATTAAGAATGTTACTGGTGATTATCCAATTCTACTTCTCGATGATGTCATGAGTGAACTAGATAACTACCGACAA
ACAGAATTGTTAAAAATGATTATTGCTGAAAATGTTCAAACCTTTATCACAACGACAAGTCTTGAACACCTTTCAAAACT
TCCAGAAGAGTTGAAAATTTTCACTGTTAATCAAGGAACTATTGAAGAAAACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.835	100	0.648
recF	Bacillus subtilis subsp. subtilis str. 168	44.715	100	0.453