Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   KPA27_RS06725 Genome accession   NZ_CP076517
Coordinates   1343055..1343537 (+) Length   160 a.a.
NCBI ID   WP_202846202.1    Uniprot ID   -
Organism   Streptococcus suis strain 39565     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1338055..1348537
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPA27_RS06700 (KPA27_06700) - 1339302..1340612 (-) 1311 WP_216330738.1 GntP family permease -
  KPA27_RS06705 (KPA27_06705) folK 1340663..1341151 (-) 489 WP_105183919.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  KPA27_RS06710 (KPA27_06710) folB 1341148..1341510 (-) 363 WP_024400723.1 dihydroneopterin aldolase -
  KPA27_RS06715 (KPA27_06715) folP 1341503..1342315 (-) 813 WP_109371587.1 dihydropteroate synthase -
  KPA27_RS06720 (KPA27_06720) folE 1342324..1342887 (-) 564 WP_216330740.1 GTP cyclohydrolase I FolE -
  KPA27_RS06725 (KPA27_06725) mutX 1343055..1343537 (+) 483 WP_202846202.1 8-oxo-dGTP diphosphatase Machinery gene
  KPA27_RS06730 (KPA27_06730) - 1343581..1344258 (-) 678 WP_024407416.1 DUF4956 domain-containing protein -
  KPA27_RS06735 (KPA27_06735) - 1344245..1344988 (-) 744 WP_024400727.1 polyphosphate polymerase domain-containing protein -
  KPA27_RS06740 (KPA27_06740) - 1345181..1345483 (+) 303 WP_024400728.1 hypothetical protein -
  KPA27_RS06745 (KPA27_06745) - 1345659..1345832 (-) 174 Protein_1291 DUF2087 domain-containing protein -
  KPA27_RS06750 (KPA27_06750) pheT 1346032..1348431 (-) 2400 WP_216330742.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18413.70 Da        Isoelectric Point: 4.4540

>NTDB_id=503171 KPA27_RS06725 WP_202846202.1 1343055..1343537(+) (mutX) [Streptococcus suis strain 39565]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQAWLLENTPFFSACFRYDGDSLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=503171 KPA27_RS06725 WP_202846202.1 1343055..1343537(+) (mutX) [Streptococcus suis strain 39565]
ATGACTAAAAAACCTGTTCAACTCGCTACTATTTGCTACATTGATAATGGCAAAGAATTTCTCCTCCTTCATCGAAATAA
AAAGGAAAACGATGTCCATCAAGGTAAATGGATTGGAGTGGGTGGCAAATTGGAACCTGGCGAAACACCACAGGCTTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAATACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTTTGATCGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACTTGGGAAGGCGATCGCCATTTTCAAGCATGGCTATTAG
AGAACACCCCCTTCTTTTCCGCTTGCTTCCGCTATGACGGGGATAGCTTGCTGGATTACAGCGTTGATTTTTATGAGGAG
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

78.431

95.625

0.75