Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   IRJ27_RS02210 Genome accession   NZ_CP064095
Coordinates   484363..484827 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain N1303-2Ay     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 479363..489827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS02190 fadH 480551..481315 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  IRJ27_RS02195 ppeE 481458..482318 (+) 861 WP_003232400.1 metallophosphoesterase -
  IRJ27_RS02200 ltdD 482375..482869 (+) 495 WP_010886500.1 L,D-transpeptidase family protein -
  IRJ27_RS02205 ykuC 482945..484237 (+) 1293 WP_003245267.1 MFS transporter -
  IRJ27_RS02210 kre 484363..484827 (+) 465 WP_003232406.1 YkyB family protein Regulator
  IRJ27_RS02215 cheV 484871..485782 (-) 912 WP_009967126.1 chemotaxis protein CheV -
  IRJ27_RS02220 - 485986..486147 (+) 162 WP_003245246.1 hypothetical protein -
  IRJ27_RS02225 dapX 486349..487530 (+) 1182 WP_003232415.1 aminotransferase A -
  IRJ27_RS02230 kinA 487541..489361 (-) 1821 WP_003245779.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=499359 IRJ27_RS02210 WP_003232406.1 484363..484827(+) (kre) [Bacillus subtilis strain N1303-2Ay]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=499359 IRJ27_RS02210 WP_003232406.1 484363..484827(+) (kre) [Bacillus subtilis strain N1303-2Ay]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1