Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   IRB21_RS08525 Genome accession   NZ_CP064089
Coordinates   1683538..1684119 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain N435-3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1678538..1689119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRB21_RS08500 - 1679205..1680383 (+) 1179 WP_242731931.1 N-acetyldiaminopimelate deacetylase -
  IRB21_RS08505 - 1680434..1680676 (+) 243 WP_024424725.1 YkuS family protein -
  IRB21_RS08510 - 1680699..1681508 (-) 810 WP_242731933.1 mechanosensitive ion channel family protein -
  IRB21_RS08515 ahpA 1681780..1682322 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  IRB21_RS08520 - 1682599..1683057 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  IRB21_RS08525 rok 1683538..1684119 (+) 582 WP_007498648.1 hypothetical protein Regulator
  IRB21_RS08530 - 1684182..1685099 (-) 918 WP_242731936.1 sigmaE regulated sporulation protein -
  IRB21_RS08535 - 1685183..1685764 (+) 582 WP_019743805.1 molybdenum cofactor guanylyltransferase -
  IRB21_RS08540 - 1685794..1686810 (+) 1017 WP_242731937.1 MoeB/ThiF family adenylyltransferase -
  IRB21_RS08545 glp 1686820..1688094 (+) 1275 WP_242731939.1 gephyrin-like molybdotransferase Glp -
  IRB21_RS08550 mobB 1688076..1688603 (+) 528 WP_242731941.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  IRB21_RS08555 - 1688596..1689087 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=498959 IRB21_RS08525 WP_007498648.1 1683538..1684119(+) (rok) [Bacillus altitudinis strain N435-3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=498959 IRB21_RS08525 WP_007498648.1 1683538..1684119(+) (rok) [Bacillus altitudinis strain N435-3]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782