Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   KIL00_RS03870 Genome accession   NZ_CP075344
Coordinates   750839..751969 (+) Length   376 a.a.
NCBI ID   WP_014479091.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 745839..756969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS03845 (KIL00_03845) - 746140..746445 (-) 306 WP_213783561.1 hypothetical protein -
  KIL00_RS03850 (KIL00_03850) yezA 746512..746718 (-) 207 WP_003233877.1 bacteriocin immunity protein -
  KIL00_RS03855 (KIL00_03855) yezG 746958..747413 (-) 456 WP_010886434.1 TIGR01741 family protein -
  KIL00_RS03860 (KIL00_03860) yeeF 747433..749442 (-) 2010 WP_213783562.1 LXG family T7SS effector deoxyribonuclease toxin YeeF -
  KIL00_RS03865 (KIL00_03865) - 749654..750676 (+) 1023 WP_003243884.1 hypothetical protein -
  KIL00_RS03870 (KIL00_03870) rapC 750839..751969 (+) 1131 WP_014479091.1 response regulator aspartate phosphatase RapH Regulator
  KIL00_RS03875 (KIL00_03875) phrH 751959..752132 (+) 174 WP_069837348.1 phosphatase RapH inhibitor PhrH -
  KIL00_RS03880 (KIL00_03880) yeeI 752292..753011 (+) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  KIL00_RS03885 (KIL00_03885) yeeK 753145..753582 (+) 438 WP_213783563.1 spore coat protein YeeK -
  KIL00_RS03890 (KIL00_03890) yezE 753697..754281 (+) 585 WP_046380840.1 TetR/AcrR family transcriptional regulator -
  KIL00_RS03895 (KIL00_03895) yesE 754360..754806 (+) 447 WP_046380841.1 nuclear transport factor 2 family protein -
  KIL00_RS03900 (KIL00_03900) yesF 754803..755672 (+) 870 WP_213783564.1 NAD(P)H-binding protein -
  KIL00_RS03905 (KIL00_03905) cotJA 755803..756051 (+) 249 WP_003219489.1 spore coat-associated protein CotJA -
  KIL00_RS03910 (KIL00_03910) cotJB 756035..756298 (+) 264 WP_003219491.1 spore coat protein CotJB -
  KIL00_RS03915 (KIL00_03915) cotJC 756313..756882 (+) 570 WP_014479096.1 spore coat protein CotJC -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 44030.39 Da        Isoelectric Point: 5.9937

>NTDB_id=497741 KIL00_RS03870 WP_014479091.1 750839..751969(+) (rapC) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQKMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEKALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=497741 KIL00_RS03870 WP_014479091.1 750839..751969(+) (rapC) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATCAATGAATGGTACAAGATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGAAGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAGCCTTACGGAAATCGTCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACCATCCCTTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAAAAGGCGCTGGAATTGGCCATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCAGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTAAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.957

100

0.41
  rapF Bacillus subtilis subsp. subtilis str. 168

40.053

100

0.402