Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF720_RS14480 | Genome accession | NZ_CP062415 |
| Coordinates | 2898466..2898936 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934764.1 | Uniprot ID | A0A9P4DKA4 |
| Organism | Staphylococcus aureus strain NAS_AN_150 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2893466..2903936
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF720_RS14440 (IF720_14375) | - | 2893481..2893801 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| IF720_RS14445 (IF720_14380) | - | 2893798..2893959 (+) | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| IF720_RS14450 (IF720_14385) | - | 2894054..2894380 (+) | 327 | WP_000165375.1 | DUF2482 family protein | - |
| IF720_RS14455 (IF720_14390) | - | 2894361..2894621 (+) | 261 | WP_000291503.1 | DUF1108 family protein | - |
| IF720_RS14460 (IF720_14395) | - | 2894630..2894893 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| IF720_RS14465 (IF720_14400) | - | 2894902..2896845 (+) | 1944 | WP_000700577.1 | AAA family ATPase | - |
| IF720_RS14470 (IF720_14405) | - | 2896847..2897767 (+) | 921 | WP_000138472.1 | recombinase RecT | - |
| IF720_RS14475 (IF720_14410) | - | 2897848..2898465 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| IF720_RS14480 (IF720_14415) | ssbA | 2898466..2898936 (+) | 471 | WP_000934764.1 | single-stranded DNA-binding protein | Machinery gene |
| IF720_RS14485 (IF720_14420) | - | 2898966..2899850 (+) | 885 | WP_000148316.1 | DnaD domain protein | - |
| IF720_RS14490 (IF720_14425) | - | 2899857..2900075 (+) | 219 | WP_000338531.1 | hypothetical protein | - |
| IF720_RS14495 (IF720_14430) | - | 2900084..2900393 (+) | 310 | Protein_2824 | RusA family crossover junction endodeoxyribonuclease | - |
| IF720_RS14500 (IF720_14435) | - | 2900406..2900774 (+) | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF720_RS14505 (IF720_14440) | - | 2900778..2901020 (+) | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| IF720_RS14510 (IF720_14445) | - | 2901035..2901199 (+) | 165 | WP_000990744.1 | hypothetical protein | - |
| IF720_RS14515 (IF720_14450) | - | 2901192..2901443 (+) | 252 | WP_001065091.1 | DUF1024 family protein | - |
| IF720_RS14520 (IF720_14455) | - | 2901433..2901615 (+) | 183 | WP_000028422.1 | hypothetical protein | - |
| IF720_RS14525 (IF720_14460) | - | 2901608..2902150 (+) | 543 | WP_000185659.1 | dUTP pyrophosphatase | - |
| IF720_RS14530 (IF720_14465) | - | 2902187..2902393 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| IF720_RS14535 (IF720_14470) | - | 2902390..2902776 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| IF720_RS14540 (IF720_14475) | - | 2902773..2902922 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| IF720_RS14545 (IF720_14480) | - | 2902922..2903122 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| IF720_RS14550 (IF720_14485) | - | 2903150..2903566 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17627.49 Da Isoelectric Point: 5.2672
>NTDB_id=489890 IF720_RS14480 WP_000934764.1 2898466..2898936(+) (ssbA) [Staphylococcus aureus strain NAS_AN_150]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=489890 IF720_RS14480 WP_000934764.1 2898466..2898936(+) (ssbA) [Staphylococcus aureus strain NAS_AN_150]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |
| ssb | Vibrio cholerae strain A1552 |
31.492 |
100 |
0.365 |