Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   J7D36_RS17115 Genome accession   NZ_CP073060
Coordinates   3627982..3628617 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain DETAB-P39     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3622982..3633617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7D36_RS17095 (J7D36_17095) - 3623060..3623875 (+) 816 WP_000011163.1 DsbC family protein -
  J7D36_RS17100 (J7D36_17100) - 3624120..3625421 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  J7D36_RS17105 (J7D36_17105) thrC 3625477..3626616 (+) 1140 WP_021510861.1 threonine synthase -
  J7D36_RS17110 (J7D36_17110) pbpG 3626723..3627769 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  J7D36_RS17115 (J7D36_17115) letA 3627982..3628617 (+) 636 WP_000633799.1 response regulator Regulator
  J7D36_RS17120 (J7D36_17120) pilS 3628628..3630196 (+) 1569 WP_001160329.1 sensor histidine kinase Regulator
  J7D36_RS17125 (J7D36_17125) - 3630221..3631642 (+) 1422 WP_021510860.1 sigma-54-dependent transcriptional regulator -
  J7D36_RS17130 (J7D36_17130) - 3631646..3632830 (-) 1185 WP_000939109.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=486363 J7D36_RS17115 WP_000633799.1 3627982..3628617(+) (letA) [Acinetobacter baumannii strain DETAB-P39]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=486363 J7D36_RS17115 WP_000633799.1 3627982..3628617(+) (letA) [Acinetobacter baumannii strain DETAB-P39]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55